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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55026.1
DDBJ      :             putative esterase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  129/915 : Eukaryota  7/199 : Viruses  1/175   --->[See Alignment]
c.69.1
:624 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   72->351 1f0nA PDBj 2e-42 40.4 %
:RPS:PDB   74->334 3e4dD PDBj 2e-25 21.8 %
:RPS:SCOP  68->273 1pv1A  c.69.1.34 * 7e-36 27.7 %
:HMM:SCOP  56->353 1pv1A_ c.69.1.34 * 2.5e-38 24.0 %
:RPS:PFM   97->275 PF00756 * Esterase 1e-21 46.4 %
:RPS:PFM   445->479 PF08310 * LGFP 1e-06 60.0 %
:RPS:PFM   482->531 PF08310 * LGFP 3e-07 50.0 %
:RPS:PFM   535->587 PF08310 * LGFP 6e-08 53.8 %
:HMM:PFM   375->425 PF08310 * LGFP 4.7e-10 41.2 51/54  
:HMM:PFM   427->480 PF08310 * LGFP 1.2e-23 55.6 54/54  
:HMM:PFM   482->533 PF08310 * LGFP 1.5e-14 50.0 52/54  
:HMM:PFM   535->587 PF08310 * LGFP 1.1e-23 59.6 52/54  
:HMM:PFM   589->613 PF08310 * LGFP 2.7e-05 52.0 25/54  
:HMM:PFM   76->341 PF00756 * Esterase 1.1e-46 33.6 223/252  
:BLT:SWISS 64->620 CSP1_CORGL e-121 43.8 %
:TM
:REPEAT 3|444->493|494->545|546->599
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55026.1 GT:GENE BAD55026.1 GT:PRODUCT putative esterase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 179594..181468 GB:FROM 179594 GB:TO 181468 GB:DIRECTION + GB:PRODUCT putative esterase GB:PROTEIN_ID BAD55026.1 LENGTH 624 SQ:AASEQ MAGVACGKPGLPSRRGGRAALGRFALIAAAMLVPIGVTVTPAVPTAVAQPATTPASATVQQAIWLTDRRVALWVNSPSMGAPVQVQLLLARDWNAKPEARFPLLIMLDGLRATDDESGWTKDAGAEEFFADKNVTVVLPVGGQSSFYADWMQPNNGRNYKWETFLTKELPPLLESQWRATDVRGMQGLSMGGTAAMFLAGRNPGFVRYAASYSGFLTTTTLGMPQAIQFAMRDAGGFDSAAMWGPPTSPEWEAHDPYLLADKLRGVSLYISSGSGTTGPFDQASGIPGVSTNYAGTGLEILSRLTSQNFVTKLGELQIPATVNYRASGTHSWPYWDFEMRQSWPQAAAALGVEPDKPACAAGGAIGALAAANGWLGDCLTGEYAVPGGLAQDFHGGRVFYSAETGAHAVGGMIGGGYQAAGGPGGALGLPTGGERDLGDGRGRMQPFQHGALYWTPQTGAQVVRGAIFDEWGRQGFERGPAGYPTAPEVRTPNKDGAVQAFEGGPFYYSPATGVFRVQGLILGKYAQLGYENSWLGFPAAEEAPLKDLGRFSRFEGGNIYWSPLSGAWAVRNGPIMDAWQSAGFENGRLGYPISDEFPVDGGVQQNFQTGFIVVRDGKAEIHGI GT:EXON 1|1-624:0| BL:SWS:NREP 1 BL:SWS:REP 64->620|CSP1_CORGL|e-121|43.8|552/657| TM:NTM 1 TM:REGION 22->44| NREPEAT 1 REPEAT 3|444->493|494->545|546->599| SEG 10->30|glpsrrggraalgrfaliaaa| SEG 37->62|vtvtpavptavaqpattpasatvqqa| SEG 358->373|acaaggaigalaaang| SEG 405->443|gahavggmigggyqaaggpggalglptggerdlgdgrgr| BL:PDB:NREP 1 BL:PDB:REP 72->351|1f0nA|2e-42|40.4|265/284| RP:PDB:NREP 1 RP:PDB:REP 74->334|3e4dD|2e-25|21.8|216/265| RP:PFM:NREP 4 RP:PFM:REP 97->275|PF00756|1e-21|46.4|153/221|Esterase| RP:PFM:REP 445->479|PF08310|1e-06|60.0|35/54|LGFP| RP:PFM:REP 482->531|PF08310|3e-07|50.0|50/54|LGFP| RP:PFM:REP 535->587|PF08310|6e-08|53.8|52/54|LGFP| HM:PFM:NREP 6 HM:PFM:REP 375->425|PF08310|4.7e-10|41.2|51/54|LGFP| HM:PFM:REP 427->480|PF08310|1.2e-23|55.6|54/54|LGFP| HM:PFM:REP 482->533|PF08310|1.5e-14|50.0|52/54|LGFP| HM:PFM:REP 535->587|PF08310|1.1e-23|59.6|52/54|LGFP| HM:PFM:REP 589->613|PF08310|2.7e-05|52.0|25/54|LGFP| HM:PFM:REP 76->341|PF00756|1.1e-46|33.6|223/252|Esterase| RP:SCP:NREP 1 RP:SCP:REP 68->273|1pv1A|7e-36|27.7|188/290|c.69.1.34| HM:SCP:REP 56->353|1pv1A_|2.5e-38|24.0|262/0|c.69.1.34|1/1|alpha/beta-Hydrolases| OP:NHOMO 384 OP:NHOMOORG 138 OP:PATTERN --------------------------------------------------1----------------- -----855BA733456666-685578666666A8A8IEFH-211A-1-1----3-3----2---213-1----------------------------------------------------------------------------------------------11--------------------------------------------------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2----------------------------------1-------------11------------------------------2----------------------------------------1-------1-----11-------------------1----1111111111-11111111-1111111111-----1--111111111111111--111--11---------------------------------------------------------1-----1-111---1-111------------------------1111111111--------------------------------------------------------------- ----------------------------------------------11------------------------------------------------------------------------------------------------------------------1-----11---1--------------------1---- --------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------- STR:NPRED 289 STR:RPRED 46.3 SQ:SECSTR ##################################################################TEEEEEEEEETTTTEEEEEEEEcGGGGTccEcccEEEEEEEccTTcccHHHHHHHHHcccHHHHHHTcEEEEcTcTTccTTcccccTTGGGTccHHHHHHTHHHHHHHHHccEEEEEEEEEcTHHHHHHHHHHHHcTTTccccEEEcccccGGGcTTTHHHHHHHHHHHcccTTHHHcccGGGTTGGGcHHHHHTTccccEEEEEEEcEEEEccEEETTcTTHHHHHHHHHHHHHHHTcTHHHHHHTTTcccEEEEEEcTTccccHHHHHHHHHHTHHHHHHHHHcccc############################################################################################################################################################################################################################################################################# DISOP:02AL 1-11| PSIPRED ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcccEEEEEEEEcHHHccEEEEEEEEccccccccccccEEEEEEcccccccccHHHHHHccHHHHHHHcccEEEEEcccccccEEccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEcHHHHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHHccccHHHHccccccHHHHHccHHHHHHHHcccEEEEEEccccccHHHcccccccccHHcccHHHHHHHcccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHcccccccccccccccccccccEEEEcccEEEEccccccEEEEcHHHHHHHHHcccccccccccccccccccccEEEEEEcccEEEEccccccEEccHHHHHHHHHHcccccccccccccccccccccccEEEccccEEEEccccccEEEEHHHHHHHHHHcccccccccccccccccccccEEEEEcccEEEEEccccEEEEEccHHHHHHHHcccccccccccccccEEccccEEEEEEccEEEEEccEEEEEEc //