[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55028.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:325 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   60->263 2czqA PDBj 2e-05 29.9 %
:RPS:PDB   56->270 1cuiA PDBj 2e-24 23.6 %
:RPS:SCOP  61->262 1bs9A  c.69.1.30 * 4e-13 17.9 %
:HMM:SCOP  53->269 1cexA_ c.69.1.30 * 1.1e-27 32.1 %
:RPS:PFM   60->264 PF01083 * Cutinase 4e-19 47.1 %
:HMM:PFM   96->263 PF01083 * Cutinase 1.5e-18 28.2 124/179  
:BLT:SWISS 61->209 CUTI_ERYGR 6e-05 31.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55028.1 GT:GENE BAD55028.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 182098..183075 GB:FROM 182098 GB:TO 183075 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55028.1 LENGTH 325 SQ:AASEQ MNARRGSRPRRSRPVGCLLFLVIAALLVAVIILLWFLLAGRLRLPGPGPEPTRPPASQPASCPDVQLISVPGTWESNSNDDPRNPTANPLSLMLNVTGPLREQFPAERLDVYTVPYVAQFSNPVAIPPDGQQSYNNSRSEGTQRTIDALAERHRECPLTTYVLAGFSQGAVIVGDVAAQIGEGKGPVPADLVLGVTLIADGRREAGPGQAIEVGATPPGVGAEVALNGLKVPGITMTGPRPGFGALADRTYTICAPGDMICDSPRQALSPVNWIPSVLSLVRAAGNPVHALYNTYVVDGNGTTATQWTVGWAAGLIESAPHPPHS GT:EXON 1|1-325:0| BL:SWS:NREP 1 BL:SWS:REP 61->209|CUTI_ERYGR|6e-05|31.5|127/100| TM:NTM 1 TM:REGION 18->40| SEG 4->14|rrgsrprrsrp| SEG 18->55|llflviaallvaviillwfllagrlrlpgpgpeptrpp| BL:PDB:NREP 1 BL:PDB:REP 60->263|2czqA|2e-05|29.9|167/205| RP:PDB:NREP 1 RP:PDB:REP 56->270|1cuiA|2e-24|23.6|161/197| RP:PFM:NREP 1 RP:PFM:REP 60->264|PF01083|4e-19|47.1|170/190|Cutinase| HM:PFM:NREP 1 HM:PFM:REP 96->263|PF01083|1.5e-18|28.2|124/179|Cutinase| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF01083|IPR000675| GO:PFM GO:0016787|"GO:hydrolase activity"|PF01083|IPR000675| RP:SCP:NREP 1 RP:SCP:REP 61->262|1bs9A|4e-13|17.9|179/207|c.69.1.30| HM:SCP:REP 53->269|1cexA_|1.1e-27|32.1|162/0|c.69.1.30|1/1|alpha/beta-Hydrolases| OP:NHOMO 58 OP:NHOMOORG 34 OP:PATTERN -------------------------------------------------------------------- -----12111111211111-11111111111112126477----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 225 STR:RPRED 69.2 SQ:SECSTR #######################################################HccGGGcccEEEEEEccTTccTTTTTTHHHHHHGGHHHHHHHHHHHHHHcGGGEEEccTTccccGGGGGG##GGTcGcTTcccHHHHHHHHHHHHHHHHHcTTcEEEEEEETHHHHHHHHHHHHHHHHccHHHHTTEEEEEEEccTTTTTTTTTccTTEEcccccccTTcccTccH#TcccTTccTTccccGGGEEEEccTTcGGGGTcccccGGHHH###HHHHHHHHcc####################################### DISOP:02AL 1-13, 47-58, 318-325| PSIPRED ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEccccccccccccccccccHHHHHHccHHHHHHHccccccEEEEEcccHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHcccccccccHHHEEEEEEEEcccccccccccccccccccccccEEEccccccccccccccccccccccccEEEEccccccEEcccccccccccHHHHHHHHHHccccEEEEEEEEccccccccHHHHHHHHHHHHHHHcccccccc //