[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55030.1
DDBJ      :             putative acyl-CoA synthetase
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  428/915 : Eukaryota  123/199 : Viruses  0/175   --->[See Alignment]
e.23.1
:652 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   58->500 3e53A PDBj 2e-54 40.3 %
:RPS:PDB   36->637 3e7wA PDBj 1e-43 17.8 %
:RPS:SCOP  32->645 1pg3A  e.23.1.1 * 6e-41 15.3 %
:HMM:SCOP  36->635 1pg4A_ e.23.1.1 * 1.8e-95 28.6 %
:RPS:PFM   21->92 PF11559 * ADIP 4e-04 35.2 %
:RPS:PFM   71->521 PF00501 * AMP-binding 3e-31 33.8 %
:HMM:PFM   71->524 PF00501 * AMP-binding 6.9e-73 28.6 391/418  
:BLT:SWISS 53->632 FAD21_MYCTU e-101 42.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55030.1 GT:GENE BAD55030.1 GT:PRODUCT putative acyl-CoA synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 184410..186368 GB:FROM 184410 GB:TO 186368 GB:DIRECTION + GB:PRODUCT putative acyl-CoA synthetase GB:PROTEIN_ID BAD55030.1 LENGTH 652 SQ:AASEQ MSPSCCVCLGGEEGMEETFDDYLDETGNIRIPEDHTLVDHVEKHTRNDANTLAYRYIDYSRERDGEVHELTWQQFGVRLRAVAARLQQVTKRGDRVAILAPQGLDYVVSFFAAIYAGTISVPLFDPDEPGHTDRLHAVLGDCEPSAILTASSSAAGVRQFFRSLPAAQRPRIIAVDAIPDSVGESWVRPDIKIDDIAYLQYTSGSTRVPAGVEITHRAVGTNLLQMVDAIKLDWNSRGVTWLPLFHDMGLLTVILPAVGGKYITIMSPSAFVRRPYRWIKELAAVSDGAGTFAAAPNFAFEHAAARGLPKNGESLDLSNVIGLINGSEPVTTSSMKKFNEAFAPYGLPKTAIKPCYGMAEATLFVSATKAEDEAKVTYVDRNELNAGRMVKVDPSAENAIAQVSCGYVALSQWAVIVDPATVESDGGGRELPDGHVGEIWLHGNNMGIGYWNRPDETQKTFRNKVTQRLAEGSHAEGAAEDADWMRTGDYGVYFEGELYITGRVKDLVIVDGRNHYPQDLEYSAQEASKALRPGFIAAFSVPANQLPAEVFEQGSHSGLKFDPDDASEQLVIVAERGPGAGKADPGPIADAVRAAISQRHGVTVRDVLLVPAGSIPRTSSGKIARRACKTAYLEGTLRGGYTQQAFPDAPEE GT:EXON 1|1-652:0| BL:SWS:NREP 1 BL:SWS:REP 53->632|FAD21_MYCTU|e-101|42.5|532/578| SEG 292->305|faaapnfafehaaa| BL:PDB:NREP 1 BL:PDB:REP 58->500|3e53A|2e-54|40.3|387/416| RP:PDB:NREP 1 RP:PDB:REP 36->637|3e7wA|1e-43|17.8|499/508| RP:PFM:NREP 2 RP:PFM:REP 21->92|PF11559|4e-04|35.2|71/151|ADIP| RP:PFM:REP 71->521|PF00501|3e-31|33.8|379/405|AMP-binding| HM:PFM:NREP 1 HM:PFM:REP 71->524|PF00501|6.9e-73|28.6|391/418|AMP-binding| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| RP:SCP:NREP 1 RP:SCP:REP 32->645|1pg3A|6e-41|15.3|531/634|e.23.1.1| HM:SCP:REP 36->635|1pg4A_|1.8e-95|28.6|503/643|e.23.1.1|1/1|Acetyl-CoA synthetase-like| OP:NHOMO 1716 OP:NHOMOORG 562 OP:PATTERN ------------------111--3111----------------1--11--1----------------- 11-161111112-2FGGFF-FC66MEFFFFFCECDC9FIH-566--------11233---322-68A95B2--11------13--2---------------1---3-1-----------------11--1-11111---35-119-6B51228----------3--37593------------11122---219111113213141232111153213-32221-------41------------------------------------------------------11---------------------------------1----2----------2-33------1--2--2-11-11---211-1----2-24113-----214591116474311111111111-223135---33-2444--1-111213142222--1-21-11111111-2111131------------------------------31721-22-2222546866631135CDDF4C6235877--21612243813443--1----3-11112-11122-1-64--1222-2222-2-1-----12212I6-1----------------------111---1-213-----1----3-1-------2-12----12---------411--1--2122222--212221111-12211221---31551----------------11122211---112122--211----222221111336-2---------------3332311--12433337768233323528111111111--112-----1-----21-1--111-------------------------------------------------------------21 --22--1------1113-11223131455242216121-11112-111132222--12-1-1------------------------------3-1------------1912555E52212213-771415H324371-123123-131-1B11123324--332121-1-61-11---1A---11-2151171112233 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 633 STR:RPRED 97.1 SQ:SECSTR ####HHHTcGGGHHHHHHHHcTTcEEccccHHHHTcHHHHHHHHHHHcTTcEEEEETTccccccccEEEEEHHHHHHHHHHHHHHHTTTccccccEEEEEcccHHHHHHHHHHHHHTccEEEEETTccHHHHHHHHHHHHHHTccEEEEccTTHHHHHcccTTcccccccEEEHHHHHTcccccccGGGcccTTcEEEEEEEccTTcccEEEEEEHHHHHHHHHHHHHHcTTTTTcEEEEcccTTcTHHHHHHHHHHTTcEEEEccHHHHHHHcHHHHHHHHHHHccHccccEEEcEEEEcHHHHHHHHTcTTcTTcTTccEEEEccccccHHHHHHHHHHcHTTTcTTcEEEEccccGGGccccEccTTcccccEEEEEHccccTTHEEEEcHHHHTTcccccccEEcTTcEEEEEcTEcTTcTTTcccccTTccEEEEEEcTTcccccTTcHHHHHHHEEEcTEETccTTcccccccTcccEEEEEEEEEEEETEEEEEEEcccEEEETTEEEEHHHHHHHHHHcTTEEcTTEEEEEEEHHHTcTTEEcTTEEEEEEEEEcccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHccGGGcccEEEEcccccccTTccccHHHHHHHHHHHHT############### DISOP:02AL 642-652| PSIPRED cccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHccccEEEEEcccccccccccEEEcHHHHHHHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHcEEEEEcccccccccHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHccccccccEEEEccccccccccccccccccccEEEEEEccccccccccEEEcHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHHHHHccEEEEEccHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHcccccccccccccEEEEEEccccccHHHHHHHHHHHHHccccccEEEEccccccHHHEEEEccccccccccccccHHHcccccEEcccccccccccccccEEccccEEEEEcHHHHcccccccccccccEEEEEEcccHHHHcccccHHHHHHHHHcccccHHcccccccccccccccEEEccEEEEcccEEEEEEEEccEEEEccEEEcHHHHHHHHHHcccccccEEEEEEEccccccccHHHHHHHHHcccccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHccccccEEEEEEccccccccccHHHHHHHccHHHccccccccccccccccccc //