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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55039.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  193/915 : Eukaryota  56/199 : Viruses  0/175   --->[See Alignment]
d.145.1
:493 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   49->225 2qpmA PDBj 4e-10 32.7 %
:RPS:PDB   41->482 3dq0A PDBj 2e-43 19.0 %
:RPS:SCOP  33->225 1i19A2  d.145.1.1 * 8e-28 16.2 %
:HMM:SCOP  22->226 1w1oA2 d.145.1.1 * 1.4e-37 32.0 %
:RPS:PFM   84->191 PF01565 * FAD_binding_4 2e-14 39.8 %
:RPS:PFM   426->490 PF04030 * ALO 2e-12 40.0 %
:HMM:PFM   81->194 PF01565 * FAD_binding_4 4.7e-32 38.1 113/138  
:HMM:PFM   429->490 PF04030 * ALO 2.3e-11 32.3 62/260  
:BLT:SWISS 129->277,363->492 YMP4_STRCO 2e-21 37.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55039.1 GT:GENE BAD55039.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(206189..207670) GB:FROM 206189 GB:TO 207670 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD55039.1 LENGTH 493 SQ:AASEQ MSTKAPTTTTTTGVDETAGSTDGATGRTEAYQLPTRTRSLTGWGRTAPTSAEVLSTSDPEVIAKAVAMVAEDNDGKPAHLRRGVIARGLGRSYGDNAQNAGGLVVDMTALNRIHRIDADSRLVDVDAGVTLDQLMKAALPFGLWVPVLPGTRQVTVGGAIGSDIHGKNHHSAGSFGNHVRSMELLTADGTVHHITPKRNAKLFWATVGGCGLTGIILRATIEMTPTETAYFIADGDVTAGLDETIAFHSDGSEDNYTYSSAWFDAMSPMPKLGRAVISRGSLAKLDELPKKLRKNPLDFTGKTFLTFPDLFPNGLLNKQTFALATEVWYRKGTTYRRKPQNLTAFYHPLDMLGEWNRAYGSRGFLQYQFVVPPEAVEEFKQILIDVQRSGHYSFLNVFKYFGQGNQAPLSFPMPGWNVCLDFPIKPGLNEFVTELDSRVLEFGGRLYTGKDSRTTAETFHKMYPRIDEWIKVRRSVDPTGVFMSDMARRLELQ GT:EXON 1|1-493:0| BL:SWS:NREP 1 BL:SWS:REP 129->277,363->492|YMP4_STRCO|2e-21|37.7|276/367| SEG 7->12|tttttt| BL:PDB:NREP 1 BL:PDB:REP 49->225|2qpmA|4e-10|32.7|171/496| RP:PDB:NREP 1 RP:PDB:REP 41->482|3dq0A|2e-43|19.0|432/498| RP:PFM:NREP 2 RP:PFM:REP 84->191|PF01565|2e-14|39.8|108/139|FAD_binding_4| RP:PFM:REP 426->490|PF04030|2e-12|40.0|65/259|ALO| HM:PFM:NREP 2 HM:PFM:REP 81->194|PF01565|4.7e-32|38.1|113/138|FAD_binding_4| HM:PFM:REP 429->490|PF04030|2.3e-11|32.3|62/260|ALO| GO:PFM:NREP 5 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01565|IPR006094| GO:PFM GO:0050660|"GO:FAD binding"|PF01565|IPR006094| GO:PFM GO:0003885|"GO:D-arabinono-1,4-lactone oxidase activity"|PF04030|IPR007173| GO:PFM GO:0016020|"GO:membrane"|PF04030|IPR007173| GO:PFM GO:0055114|"GO:oxidation reduction"|PF04030|IPR007173| RP:SCP:NREP 1 RP:SCP:REP 33->225|1i19A2|8e-28|16.2|185/217|d.145.1.1| HM:SCP:REP 22->226|1w1oA2|1.4e-37|32.0|200/206|d.145.1.1|1/1|FAD-binding domain| OP:NHOMO 309 OP:NHOMOORG 255 OP:PATTERN -----------------------1------------------------11111--------------- ---1111111111111111-12111311111121112133----211-------------1--1-351112-------------1--------------1-----1--1-----------------1-------1-111-----1-----11-------------1---1--1-------------11---1-111111111-111111----111111----1--------------------------------------------------------------------------------------------------------1111111-1---------1-------------1----1---------11--------111-1----2---11-11111-11---1--211-1------112-1-111-----2--1-----------------1------------------------------------------21111-1-----1122------1-1-----1--1-2211111111--1-----1------------1-11-----------------------1-2--1--------------------1---2------11--1------------------------1-------------------------------------------------------------------------------------------------1--111111--111-1---------------------1----1---11--------1------------------------111-------------1-111111------------------------------------------------- ---------------1-33-1-1-1-----------111--11---1--------1-----------------------------------1-1-1-----1-1-1----2-----1----11124-11141111-11--11111-1---1--1-112-------1-------1-----------2216251------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 479 STR:RPRED 97.2 SQ:SECSTR #############TcccEEEcccccccHHHHHHTTccccGccTTcccccccEEEccccHHHHHHHHHHHHHcTTccccTcEEEEEEEccccccccTTccTTcEEEEGGGGGccccccTTccEEEEETTccHHHHHHHHHTTTEEEccccccccccHHHHHTTccccTTHHHHccGGGcEEEEEEEETTccEEEEEccccHHHHHHHTTcTTccEEEEEEEEEEEEEEEEEEccHHHHHHHHHHHHccccccccccEEEEEEEEGGGHHHHHHHTccccHHHHHHHHHHHHHHTccEEEEEEEEEEEcccTTHHHHHHHHHHHHHTTccccTTcEEEEEEEHHHHHTHHHHHTTccHTTccccccccEEEEEEGGGHHHHHHcccccTTccccccEEEEEEEGGGccTTcccccccccEEccccccTTHHHHHHHHHHHHHHHccEEcccccccHHHHHHHHcHHHHHHHHHHHHHHcTTcccGcccTTccHH# DISOP:02AL 1-10| PSIPRED cccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHcccccccccEEEEcccHHHHHHHHHHHHHcccccccccccEEEEEEcccccccccccccEEEEEHHHcccEEEEEccccEEEEEccccHHHHHHHHHHcccEEEEccccccccccccccccccccccccccccccEEEEEEEEEccccEEEEcccccHHHHHHHHHccccEEEEEEEEEEEEEcccEEEEEEccHHHHHHHHHHHHHHHHHccccEEEEHHHHHccccccccEEEEEEccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcHHcccccccccEEEEEEccHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccccccEEEEEccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHcccHHHHHHHHHHHccccccccHHHHHHccc //