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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55042.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  47/68 : Bacteria  541/915 : Eukaryota  12/199 : Viruses  0/175   --->[See Alignment]
b.52.2c.81.1
:732 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->288 2vpyA PDBj 3e-29 31.6 %
:RPS:PDB   17->727 2e7zA PDBj 5e-64 17.1 %
:RPS:SCOP  17->509 1aa6A2  c.81.1.1 * 9e-54 21.5 %
:RPS:SCOP  609->732 1ti2A1  b.52.2.2 * 2e-13 14.5 %
:HMM:SCOP  10->651 1kqfA2 c.81.1.1 * 4.8e-116 32.0 %
:HMM:SCOP  606->732 1ti6A1 b.52.2.2 * 6.2e-29 38.1 %
:RPS:PFM   13->60 PF04879 * Molybdop_Fe4S4 2e-05 44.7 %
:RPS:PFM   69->486 PF00384 * Molybdopterin 1e-28 30.2 %
:RPS:PFM   640->691 PF01568 * Molydop_binding 1e-07 48.1 %
:HMM:PFM   69->439 PF00384 * Molybdopterin 2.5e-35 24.1 365/432  
:HMM:PFM   610->725 PF01568 * Molydop_binding 8.3e-22 35.8 106/109  
:HMM:PFM   17->62 PF04879 * Molybdop_Fe4S4 3.7e-12 42.2 45/55  
:BLT:SWISS 6->288 PSRA_WOLSU 2e-25 27.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55042.1 GT:GENE BAD55042.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(209104..211302) GB:FROM 209104 GB:TO 211302 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD55042.1 LENGTH 732 SQ:AASEQ MGTMAQITDSARKLLRTCPLCEAVCGLEITLDAADHVVSVRGDKLDPFSKGFLCPKGASLGKLDEDPERVTEPMIRDRATGAWRTAGWDEAFDYIAERFPAITAEYGNQAVGMYVGNPNAHTVAGALYLPVLIRALGTKNLFSASTADQMPKQVAAGLMFGDPLTVPVPDLDRTDYLLMLGANPLESNGSLCTAPDFPGRLAALRKRGGRFVVVDPRATRTAERADEHLFIRPGTDVFLLFGLVHTLFAENLTEVRVAVNGLDEVRAAAAEFTPEVVAAHTGVPAETVVRLARELAAAPTAAVYARIGTCTAEFGTLTQWLVDVLNVLTGNLDSPGGAMFATAAATGIVRSKPFRTGRWRSRVRGLGEAMGELPVATLADEILTPGEGQIRAMVTVAGNPALSAPGAARLDAALAGLDFMLSVDRYLNETTRHADVILPPPRTVQSPHYDFALLQFAVRNYARYSRPLVPLGDRPSEAAVLARLGAALTGRPHNGTGDQDPVAAVDELVIAGMLHKAGIPDRRDELIGANSTEQRIDLMLRLGPYGEWNGGTLNLQVLLDNPHGLDLGPLTPRLPGALRTASGAVELAPEPLLDDLARLRARMADEAPEFVLIGRRHLRSNNSWLHNVPALVGGTNRCTLQINPADVDRLGLGDQAVVKSAAGTLTVPLEPTDTIMPGVVSLPHGWGHGAGTQSVARANAGVNANVLTDDSIVDTPSGNAVFNGVPVTLLPV GT:EXON 1|1-732:0| BL:SWS:NREP 1 BL:SWS:REP 6->288|PSRA_WOLSU|2e-25|27.9|269/763| SEG 199->210|grlaalrkrggr| SEG 290->302|rlarelaaaptaa| SEG 336->347|ggamfataaatg| SEG 401->418|alsapgaarldaalagld| SEG 586->607|elapepllddlarlrarmadea| SEG 695->706|varanagvnanv| BL:PDB:NREP 1 BL:PDB:REP 12->288|2vpyA|3e-29|31.6|266/734| RP:PDB:NREP 1 RP:PDB:REP 17->727|2e7zA|5e-64|17.1|671/727| RP:PFM:NREP 3 RP:PFM:REP 13->60|PF04879|2e-05|44.7|47/55|Molybdop_Fe4S4| RP:PFM:REP 69->486|PF00384|1e-28|30.2|388/423|Molybdopterin| RP:PFM:REP 640->691|PF01568|1e-07|48.1|52/112|Molydop_binding| HM:PFM:NREP 3 HM:PFM:REP 69->439|PF00384|2.5e-35|24.1|365/432|Molybdopterin| HM:PFM:REP 610->725|PF01568|8.3e-22|35.8|106/109|Molydop_binding| HM:PFM:REP 17->62|PF04879|3.7e-12|42.2|45/55|Molybdop_Fe4S4| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF04879|IPR006963| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00384|IPR006656| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01568|IPR006657| GO:PFM GO:0030151|"GO:molybdenum ion binding"|PF01568|IPR006657| RP:SCP:NREP 2 RP:SCP:REP 17->509|1aa6A2|9e-54|21.5|480/564|c.81.1.1| RP:SCP:REP 609->732|1ti2A1|2e-13|14.5|124/147|b.52.2.2| HM:SCP:REP 10->651|1kqfA2|4.8e-116|32.0|606/817|c.81.1.1|1/1|Formate dehydrogenase/DMSO reductase, domains 1-3| HM:SCP:REP 606->732|1ti6A1|6.2e-29|38.1|126/0|b.52.2.2|1/1|ADC-like| OP:NHOMO 1659 OP:NHOMOORG 600 OP:PATTERN -----121212222222-111--14---2-231-11-122221121453--1-12113342122---- 2-413--------123211-18--351111125565324412131--11---1131----1121122222---------3C51312-2-------------1---111-------------------2222--1-2111221112-21111111111111111111-1111------------33121---2-22222222212222221144132211311--11-111121111111111111111---111---------------------------------------------------------------------112-1----------12-----------4--21QP2231-226---1---1312111-----255342-22524211111111111-4455465544--333322322244342-13232411235--------3---2411-----------------------------11231-133124445443455555456666456456765-256336133323654542222223----------633-BC8426444455A-44473161364251329212211111-1-1-------16121114212122-2-23354527854434575397----531------64322416666641446-366555566646646666334455114444144544446763434223233--122232232322-------------42422---3-1-1111---12222211-112134344232334435222---------12334-11113323311-2122---------4-22------------------------------------------1-------22- ------------------1-11-1-1----------1----------------1-111---------------------------------------------------------------------------------------------------------1------------------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 730 STR:RPRED 99.7 SQ:SECSTR ##cHHHHHHHHHHHHcEccccTTccEEEEEEcTTccEEEEcccccccccTTcccHHHHTHHHHHTcTTcccccEEccTTcccEEEccHHHHHHHHHHHHHHHHHHHcGGGEEEEEcGGGTcccTTHHHHHHHHHHHTcccEEcGGGGTTHHHHHHHHHHHccccccEEEcTTTccEEEEEcccccTTccHHcccccHHHHHHHHHHHTcEEEEEcccccHHHHHccEEEcccTTcHHHHHHHHHHHHHHTTcccHHHHEEcHHHHHHHHTTccHHHHHHHHcccHHHHHHHHHHHHHcccEEcccccGGGccTTHHHHHHHHHHHHHHHTTTTcccEEEccccTTcccHHHcTTTTTcGGGcHHHHGGGHHHHHHHHccccccccccccccEEEEEcccGGGccccHHHHHHHHHTccEEEEEEccccTTGGGccEEEEcccccGGGcccccccccTcccEEEccccccccTTcccHHHHHHHHHHHTTTTcGGGcccccHHHHHHHHTGGGTccHHHHTTccEEEccccccccTTcccccccccGGGccccEEcccHHHHHHTcccccccccccccTTTcHHHcTTcccccccccccccTTcHHHccEEEEEccccTTccTTccccTTHHHHHccccEEEEcHHHHHHHTcTcEEEEEccccEEEEEEEEcTTccTTEEEEccccccTTccccGGGTTTTHHHHcGGcGGGccTTTcccccEEEEEEEEEc DISOP:02AL 1-2, 4-8| PSIPRED cccccccccccEEEEEEEccccccccEEEEEEEccEEEEEEcccccccccccccHHHHHHHHHHHccccccccEEEccccccEEEccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccHHHHHcccEEEEEcccHHHHcccccHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHEEEccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHHccccEEEEEEccHHHcccHHHHHHHHHHHHHHHHHHcccccEEcccccccccccccccccccccHHHHHHHHHcccccccHHHHHHHccccccEEEEEEEcccHHHHcccHHHHHHHHccccEEEEEccccccHHHHHHHHHccccHHcccccccccEEccccEEEEcccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccHHHcccccHHHHHHHHHHHcccccccccccccHHHHHHHHccccccccccccccccccccccEEEEEcHHcccccccccccccccccEEEEccccccEEEEEEcccHHHHHcccccEEEEcHHHHHHcccccEEEEEEcccEEEEEEEEcccccccEEEEEEccccccccccccccccccccccccccccccccccccccccEEEEEEEc //