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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55047.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  105/915 : Eukaryota  13/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:487 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  16->65 1pw4A  f.38.1.1 * 3e-05 16.3 %
:HMM:SCOP  1->482 1pw4A_ f.38.1.1 * 2.4e-67 31.1 %
:HMM:PFM   31->421 PF07690 * MFS_1 4.4e-53 30.7 342/353  
:BLT:SWISS 25->429 LMRA_STRLN 4e-18 43.8 %
:PROS 81->97|PS00216|SUGAR_TRANSPORT_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55047.1 GT:GENE BAD55047.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 214422..215885 GB:FROM 214422 GB:TO 215885 GB:DIRECTION + GB:PRODUCT putative transporter GB:PROTEIN_ID BAD55047.1 LENGTH 487 SQ:AASEQ MTSPATLSAAAAPALDPTKWPVRLWGMLITLCVVLFLDGLDVSMIGVALPSIGAELDMSTSTLQWLVSGYVLGYGGLLLLGGRTADLLGRRKVFLIALAVFALASLAGGLVSSGPLLILTRFVKGLAAAFTAPTGLSIITTTFAEGPARNKALSIYTVFGAGGYSSGLLFGGLMTGMGWRWTFLLPVPIALAALAAAWVLVPKDEPAEEGGHDLLGAALSTAAMLLLVYTVVTAPEVGWNSARTVGSFAAVAVLFAAFLAVERRVAHPLVRLGILRKTTLVRASLAIVAVAGSYFSWQFIVTLYLQDTLGWSPLRLALALLPVGLLVALSAVFSDKLVDRFGTGPIIGVTMTVMAVGYLLFLRLDTHPSYLTMILPAVLLIGIGWIGFPAINIQATSGIDDDEQGLAAGVLQTAMQVGGAVMLAVTTAVISSGGHGSGEPQQMLDAYRPGLTFAAGIAVVGALVALSAFAPALRRRRAAEPEVELVG GT:EXON 1|1-487:0| BL:SWS:NREP 1 BL:SWS:REP 25->429|LMRA_STRLN|4e-18|43.8|404/481| PROS 81->97|PS00216|SUGAR_TRANSPORT_1|PDOC00190| TM:NTM 14 TM:REGION 27->49| TM:REGION 63->85| TM:REGION 95->117| TM:REGION 124->146| TM:REGION 153->175| TM:REGION 181->203| TM:REGION 214->236| TM:REGION 249->271| TM:REGION 284->306| TM:REGION 314->336| TM:REGION 342->363| TM:REGION 370->392| TM:REGION 408->430| TM:REGION 451->473| SEG 2->15|tspatlsaaaapal| SEG 66->82|lvsgyvlgyggllllgg| SEG 93->117|vflialavfalaslagglvssgpll| SEG 159->178|fgaggyssgllfgglmtgmg| SEG 184->202|llpvpialaalaaawvlvp| SEG 248->261|faavavlfaaflav| SEG 309->331|lgwsplrlalallpvgllvalsa| SEG 453->486|faagiavvgalvalsafapalrrrraaepevelv| HM:PFM:NREP 1 HM:PFM:REP 31->421|PF07690|4.4e-53|30.7|342/353|MFS_1| RP:SCP:NREP 1 RP:SCP:REP 16->65|1pw4A|3e-05|16.3|49/434|f.38.1.1| HM:SCP:REP 1->482|1pw4A_|2.4e-67|31.1|412/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 213 OP:NHOMOORG 120 OP:PATTERN -------------------------------------------1-------1---------------- ---1C--1------2--22-22112322222143244A43-62511---2--3-------1-1-1-1B451---------------------------------------------------------------------------------------------------------------------------11111--1-11---1------1-1--------111-1-3--------------------2-1-11-------------1-1------------11-------------------------------------1-111-----1----------------------------11-----------------------------------------1-------------2------11----------------------------------------------------------------------21211----1-1111--22--------4------11---------111-------------------------------1---------------------------------------------------1----------------------------------------------------------------------------------1---------------------------------------------------------1---------------------------11-1-1-2---------------------------------1---------1-------------------------------------------------------------- ---------------1-----1-211--------------------1--11-11--1-1------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-22, 470-484| PSIPRED cccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc //