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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55053.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:587 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   127->534 PF09913 * DUF2142 5e-18 27.9 %
:HMM:PFM   119->536 PF09913 * DUF2142 1.3e-104 35.3 380/389  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55053.1 GT:GENE BAD55053.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(220843..222606) GB:FROM 220843 GB:TO 222606 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55053.1 LENGTH 587 SQ:AASEQ MTTSADRNTATDSGDSESDTTSDTTSGTTSGTTSTVTGRDRSESGADSATTTDPTITDPATVESATADTTSTHAARTTVETTGAATEPAGRTAPIRAFARRAHRRFGGATLAFALLATLFGAVFAVITPPFWGHDEITQFGRAYQVAHGGFLPTEIEDDRGVAYGGVIPPGIDDLMGYAFHDYQENPEEPGAMVADPGAYERLRSADIGTELRPIWFTNTAAYSPVAYVPAAVGIRVAEAVGLDVGGVVLLTRLAGLLGYLVVAGFALYALRAHRIQWLAFTVAVLPIAIFQAGTVTADTMTNALALLVSALLVKGLFLGRDLTRAETVALLAATLLLPLSKPTYVLLAMLVVLIPVRRFAFFGGVAATGFDWRRLIPWVFAGTGAVAFAIWMKIAAPTGDGMSLMRPRHQWYTVKPDEQLGEILGDPFRFLGVFRDSIVYRDQRWFTQFFGELGFAYIDVPALAVLGCLLALAVSLGIGDRMDAAAATTRRTLLVALTVAASVAMIYVTLYMSFTPVGFYIIDGVQGRYFVPLALTGCAVLLRWMPWRLTDAQGRTPTWGPGLTVAAATTVALVATVVKYHSIVWG GT:EXON 1|1-587:0| TM:NTM 11 TM:REGION 109->131| TM:REGION 224->246| TM:REGION 252->274| TM:REGION 276->298| TM:REGION 301->323| TM:REGION 347->369| TM:REGION 376->398| TM:REGION 453->475| TM:REGION 497->519| TM:REGION 528->550| TM:REGION 564->586| SEG 9->38|tatdsgdsesdttsdttsgttsgttstvtg| SEG 49->61|atttdptitdpat| SEG 65->82|atadttsthaarttvett| SEG 96->126|rafarrahrrfggatlafallatlfgavfav| SEG 221->233|aayspvayvpaav| SEG 241->268|vgldvggvvlltrlagllgylvvagfal| SEG 304->319|alallvsallvkglfl| SEG 323->340|ltraetvallaatlllpl| SEG 360->371|faffggvaatgf| SEG 463->478|alavlgcllalavslg| SEG 485->505|aaaattrrtllvaltvaasva| SEG 564->579|ltvaaattvalvatvv| RP:PFM:NREP 1 RP:PFM:REP 127->534|PF09913|5e-18|27.9|362/382|DUF2142| HM:PFM:NREP 1 HM:PFM:REP 119->536|PF09913|1.3e-104|35.3|380/389|DUF2142| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-26, 36-49| PSIPRED cccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccHHHHcEEEccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccccEEEcccEEEEEEccccccccHHHHHHHHccccccccccHHHHHHHHHcccccccHHHHHcccccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHcccccccHHHccccccEEEEccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccEEHHHHHHHHHHHHHHcccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHcc //