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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55054.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  48/68 : Bacteria  79/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.68.1
:334 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->92 3e26A PDBj 1e-07 39.0 %
:RPS:PDB   10->119 3ckqA PDBj 2e-12 29.1 %
:RPS:SCOP  10->115 1omxA  c.68.1.15 * 2e-11 15.1 %
:HMM:SCOP  10->259 1xhbA2 c.68.1.17 * 1.8e-23 21.6 %
:RPS:PFM   12->119 PF00535 * Glycos_transf_2 6e-09 30.6 %
:HMM:PFM   13->166 PF00535 * Glycos_transf_2 5.8e-18 20.8 154/169  
:BLT:SWISS 11->132 RFBJ_SHIFL 1e-34 50.8 %
:BLT:SWISS 154->307 Y2094_SHIFL 3e-22 38.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55054.1 GT:GENE BAD55054.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(222603..223607) GB:FROM 222603 GB:TO 223607 GB:DIRECTION - GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD55054.1 LENGTH 334 SQ:AASEQ MTRVDSTDLRIAAVVPCHNEEASVAKVVTDLQAAVPGIVVYVYDNLSTDRTAERAREAGAIVRHEHTKGKGNVVRRAFADIEADVYLMIDGDDTYEASAAPLMIKTLLEGPYDHVLGVRKQDEGASAYRAGHETGNKVLNGVVGKVFGENVEDMLSGFRVFSRRFVKSFPAVSREFEIETELTVHSLHLRVPQTSVPVGFRDRPAGSESKLRTYHDGFKILALIIGLARHERPVAFYGLFGSLAWLLSVVLTVPIVIEFTRTHEVPRFPTLFLGFTLLLLGSLAWTAGLILDGIRRSRHEASRLVYLRYSAVGADEPADGQVRERGLRGDGTAR GT:EXON 1|1-334:0| BL:SWS:NREP 2 BL:SWS:REP 11->132|RFBJ_SHIFL|1e-34|50.8|122/129| BL:SWS:REP 154->307|Y2094_SHIFL|3e-22|38.3|154/163| TM:NTM 3 TM:REGION 23->45| TM:REGION 236->258| TM:REGION 270->292| SEG 135->148|gnkvlngvvgkvfg| SEG 158->169|frvfsrrfvksf| SEG 270->289|tlflgftllllgslawtagl| BL:PDB:NREP 1 BL:PDB:REP 11->92|3e26A|1e-07|39.0|82/274| RP:PDB:NREP 1 RP:PDB:REP 10->119|3ckqA|2e-12|29.1|110/302| RP:PFM:NREP 1 RP:PFM:REP 12->119|PF00535|6e-09|30.6|108/148|Glycos_transf_2| HM:PFM:NREP 1 HM:PFM:REP 13->166|PF00535|5.8e-18|20.8|154/169|Glycos_transf_2| RP:SCP:NREP 1 RP:SCP:REP 10->115|1omxA|2e-11|15.1|106/250|c.68.1.15| HM:SCP:REP 10->259|1xhbA2|1.8e-23|21.6|250/0|c.68.1.17|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 157 OP:NHOMOORG 128 OP:PATTERN -----1--1111-1--1-11112221112112122--1--11-111312121211-111111111--- --1-1--------------------1----------1----1--1--------------------------1111112--2-----------------------1-------------------------------122-----1--21-111-----------1---1----------------------11-------------------------11------11--------------------------------1-------------1------------11-------------------------------------1-------------------------------------------------------------11----11--------------------------1--111-111-------------------------211---11--------------------------------1-2-------------------2---------------------1---1-1------------------------2--------------1--1----------11------------------------------1--------------------------------1-----------------------------------------------------------------------22-----------------------------------------------------------1---------------------------1-----------1----12-21----------111---------------------------------------------------1- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 229 STR:RPRED 68.6 SQ:SECSTR #########cEEEEEEEcccTTTHHHHHHHHGGGcTTcEEEEEEcccccTHHHHHHTTTccTTccccccHHHHHHHHHHHccccEEEEccccccccTTHHHHHHHHHHccccccEEEEEcccH########HHHHTHHHHHHHHcGGGTTcccTTcccEEEEHHHHHHccccGGGHHHHHHHHHHHHHcTTcEEEEEccccccccH##HHHHHHHHHHHHHHHHTTccccccccEEccccEEcccccc###################################################################################### DISOP:02AL 1-6, 316-334| PSIPRED cccccccccEEEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHcccEEEEcccccHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccEEcHHHHHHHHHccccEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccccccccHHHHHcccccccccc //