[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55056.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  71/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.68.1
:636 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   174->430 2d7iA PDBj 3e-08 11.1 %
:RPS:SCOP  171->407 1xhbA2  c.68.1.17 * 2e-10 14.1 %
:HMM:SCOP  178->430 1fo8A_ c.68.1.10 * 1.9e-24 27.9 %
:HMM:PFM   184->293 PF00535 * Glycos_transf_2 2e-10 24.2 99/169  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55056.1 GT:GENE BAD55056.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 224332..226242 GB:FROM 224332 GB:TO 226242 GB:DIRECTION + GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD55056.1 LENGTH 636 SQ:AASEQ MDQSATQAVTESNDHRIAAAAPAALRVDHRAPDRLVLQRGIFTGPSAKVSDELYAVVKGKAARERQTLRLEKGATAHTNTYFGRFAASYWQRWTTVTEVTATMTLEVGKRARVRLVASDIAGHRRIIDTLTTAESGTVVLSAPLDQYVDGGALWLEFDADGGELGIAELVWTAPAPERVRPVAIAICTFNRAADCAETVAALAADPTVLAAIDAVYVVDQGTDLVADRPRFREVEPAFGDKLRYIRQPNLGGAGGFTRGLYEVSAVNEHADVILMDDDILCEPETVLRLNAFANLTVEPTLVGAQMLFLLNPDYLNVGAEEVHLHELRHGQKVPKALRNTSMLKKNQERRVDAGYNAWWTCLIPAEVVAKIGLPIPIFFQWDDVEYGLRAREHGFVTVTLPNAAVWHADFYWKDYDDWARYFSTRNSLIVGAMHTDLDGKAITKQFFRTIAEHLVAMQYGLVHTTLQGIEDFLEGPKVLRDGGVAALAAARAQRADYPETIKHPAANPPVPSAEIQVRRAGGEPSRALLVLVKRAVNQWFGRTQHGLIGVTREDAHWWHVSLFDHVVVTDASQSGVRVRRRDKARARALLLRTVRVLRRLRRELPALQEQYRAAMPELTSRANWERLYGIGAGERS GT:EXON 1|1-636:0| SEG 18->24|aaaapaa| SEG 94->107|ttvtevtatmtlev| SEG 198->211|tvaalaadptvlaa| SEG 478->496|vlrdggvaalaaaraqrad| SEG 576->607|vrvrrrdkararalllrtvrvlrrlrrelpal| RP:PDB:NREP 1 RP:PDB:REP 174->430|2d7iA|3e-08|11.1|253/536| HM:PFM:NREP 1 HM:PFM:REP 184->293|PF00535|2e-10|24.2|99/169|Glycos_transf_2| RP:SCP:NREP 1 RP:SCP:REP 171->407|1xhbA2|2e-10|14.1|234/316|c.68.1.17| HM:SCP:REP 178->430|1fo8A_|1.9e-24|27.9|208/0|c.68.1.10|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 92 OP:NHOMOORG 71 OP:PATTERN -------------------------------------------------------------------- -----11111111111111-11111111111111112222----112--11-1111-1----1--13-----222--3----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------11----------------------------------------------------------------------------------------------22222222---2-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1-1-11---1-1---------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 277 STR:RPRED 43.6 SQ:SECSTR #############################################################################################################################################################################cEEcccccEEEEEEEccccHHHHHHHHHHHHHHccGGGEEEEEEEEcccccGGGTHHHHHHHTTcTTEEEEEccccccHHHHHHHHHHHcccHccccEEEEccccEEEcTTccHHHHHHHHHcTTEEEEEEEEEEcTTTccEEccTTcccEEEEcTTccEEEEcccTTTccccTTccEEccccccccEEEEHHHHHHTTcccTTccccHHHHHHHHHHHTTcEEEEEEEEEEEEcccccccccccccccHHHHHHHHccccEEccccccccccHHHH########################################################################################################################################################################################## DISOP:02AL 1-10, 634-636| PSIPRED cccHHHHHHHcccccEEEEEccccEEEccccccEEEEEEEcccccccccccccHHHHccccccccEEEEEccccEEEEEccHHHHHHHHHHHHcccccEEEEEEEEEEEEEEEEEEEEEccccEEEEccccccccEEEEEEccccccccccEEEEEEcccccEEEEccccccccccccccEEEEEEEccccHHHHHHHHHHHHHcccccccEEEEEEEcccccccHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHHccccEEEEEEEEEcccccEEcccccEEEccccccccccccccccccccHHHHcccccEEEEHHHHHHHHHHHHHHcccccHHHEEEEHHHHHHHHHHcccEEEEEccEEEEEcccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccHHHHHHHHHHccccccEEEEcccccccccHHccccccccccccEEEEEEEccHHHHccccccccccccccccccEEEEccccEEEEEccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccc //