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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55063.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  582/915 : Eukaryota  44/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:400 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->399 3caiA PDBj e-101 50.1 %
:RPS:PDB   3->399 3caiA PDBj 3e-35 55.4 %
:RPS:SCOP  20->399 1elqA  c.67.1.3 * 3e-27 21.1 %
:HMM:SCOP  3->399 1c0nA_ c.67.1.3 * 3.2e-54 29.6 %
:RPS:PFM   68->392 PF00266 * Aminotran_5 6e-21 33.0 %
:HMM:PFM   21->392 PF00266 * Aminotran_5 3.4e-34 29.7 357/371  
:BLT:SWISS 3->396 CSD_MYCPA 4e-21 28.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55063.1 GT:GENE BAD55063.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 232296..233498 GB:FROM 232296 GB:TO 233498 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55063.1 LENGTH 400 SQ:AASEQ MTYDVARVRGLIPSLGDGWIHLDPQAGMLVPDVVSRAVSTGFRTASFSHLGRNNAARRSAAILDAAREAVADLVGGDPAGVVLGPDRAVLLAWLAESLSSRLGLGTGIVLSRLDDEANVAPWLRIANRYGAHVRWAEVEIETCEMPSWQFEELIGPTARLVALTAASPIVGSAPAVRVAADRVHEVGGLLVADAFGAAPYALIDIDELNADVVALSAPAWGGPQIGALVFRDPAFLDRIPSMSLNPYAKGAERLEVGGHQYTLLAGLTSSIDFLAGLDDRARGTRRERLEISITSLQDYHDQLFEHLMDTLDKIPNLTVIGRASTRIPTVSFTIAGMQAEKVAATLADARISTLSGVHGGSRLLDALGVNDEGGAVTVGLAPYTTRFEIDQLGRALAALD GT:EXON 1|1-400:0| BL:SWS:NREP 1 BL:SWS:REP 3->396|CSD_MYCPA|4e-21|28.6|381/685| SEG 55->67|aarrsaaildaar| BL:PDB:NREP 1 BL:PDB:REP 3->399|3caiA|e-101|50.1|395/396| RP:PDB:NREP 1 RP:PDB:REP 3->399|3caiA|3e-35|55.4|395/396| RP:PFM:NREP 1 RP:PFM:REP 68->392|PF00266|6e-21|33.0|297/359|Aminotran_5| HM:PFM:NREP 1 HM:PFM:REP 21->392|PF00266|3.4e-34|29.7|357/371|Aminotran_5| GO:PFM:NREP 1 GO:PFM GO:0008152|"GO:metabolic process"|PF00266|IPR000192| RP:SCP:NREP 1 RP:SCP:REP 20->399|1elqA|3e-27|21.1|346/381|c.67.1.3| HM:SCP:REP 3->399|1c0nA_|3.2e-54|29.6|375/0|c.67.1.3|1/1|PLP-dependent transferases| OP:NHOMO 882 OP:NHOMOORG 643 OP:PATTERN --1-------------1-------11111111-----------22123----------------2-1- -11-122222222233322-2233232222222222232211111111111121---1--42214232221-1111--11212-----1111111111-11212222211--------------1-----------21122---22-1-111211121111--11122221-1-----1111-11111----1-11111111111111111--111111-111111111111-11111111111111111111---1--11-111111--111111-1111111111111111111111111111111111111111111111---11-----------1------1--1-11--------1----221----1-2111111111212221112221211111111111-2212212213121--1222111212211111122222221111111111111212-----------------------------11111--------111--1111----1111--1-2--1-------1-1111111--1--121---------21111-1------------------1----11-1111-1--------------------------221111--122-11111-1---11111111---111-------2112-212222222222-22222222222222222222222222-2221222222222212422212221-222222222233-11--1---11111-113111---------1-1111-1-1---31----1111-1111-11111111111112222222222232211111111111111----111111----------1-1-------------------------1-1-----11- ---------------1111-221-131-------------------11113111--111-------------------------------2-11-1-----------1-------------------------------------------------------------------1111D111112111-1-11----2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 400 STR:RPRED 100.0 SQ:SECSTR cGccHHHHHHTcTTTTcccEEccGGGcccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHTccGGGEEEEccHHHHHHHHHHHTGGGGcTTcEEEEETTccGGGTHHHHHHHHHHccEEEEEcccTTTccccGGGHHHHccTTEEEEEEEcccTTTccccccHHHHHHHHHTTcEEEEEcTTTTTTccccHHHHcccEEEEEGGGGTccccEEEEEccHHHHHTcccccccTTccGGGGGccccccHHHHHHHHHHHHHHHTccTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTEEEcccccccccEEEEEETTccHHHHHHHHHHTTEEcEcEEccccHHHHHHTTTTTTccEEEEccTTccHHHHHHHHHHHHTcH DISOP:02AL 400-401| PSIPRED ccccHHHHHHHcccccccEEEEEccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHEEEcccHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHcccEEEEEEEccccccccHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHcccEEEEEcccccccccccHHHccccEEEEEcccccccccEEEEEEcHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccEEEEEEccccHHHHHHHHHHccEEEEEccccHHHHHHHccccccccEEEEEccccccHHHHHHHHHHHHHHc //