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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55064.1
DDBJ      :             putative quinone oxidoreductase
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  566/915 : Eukaryota  183/199 : Viruses  0/175   --->[See Alignment]
b.35.1c.2.1
:334 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->331 2j8zA PDBj 1e-55 38.4 %
:RPS:PDB   1->331 2c0cA PDBj 7e-45 22.2 %
:RPS:SCOP  1->114 1iyzA1  b.35.1.2 * 8e-28 41.6 %
:RPS:SCOP  126->293 1o89A2  c.2.1.1 * 6e-19 18.4 %
:HMM:SCOP  1->147 1xa0A1 b.35.1.2 * 1e-43 47.5 %
:HMM:SCOP  112->297 1vj1A2 c.2.1.1 * 1.8e-42 40.2 %
:RPS:PFM   28->106 PF08240 * ADH_N 2e-05 50.0 %
:RPS:PFM   151->256 PF00107 * ADH_zinc_N 9e-13 41.7 %
:HMM:PFM   151->269 PF00107 * ADH_zinc_N 2.2e-27 36.2 116/130  
:HMM:PFM   28->87 PF08240 * ADH_N 4.5e-16 46.7 60/109  
:HMM:PFM   110->169 PF10686 * DUF2493 4.8e-06 28.8 59/71  
:BLT:SWISS 1->331 QORX_HUMAN 1e-52 37.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55064.1 GT:GENE BAD55064.1 GT:PRODUCT putative quinone oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(233508..234512) GB:FROM 233508 GB:TO 234512 GB:DIRECTION - GB:PRODUCT putative quinone oxidoreductase GB:PROTEIN_ID BAD55064.1 LENGTH 334 SQ:AASEQ MRAIELNGFGGPEVLVWGKAADPVPGHGEVLIDVVAAGVNRADLLQRQGNYPPPAGASDILGLECSGVVAEVGEGVREWQVGDRVCALLSGGGYAERVVVPATQVLPVPEGMDLAAAAGLPEVAATVWSNLVMTAGLHAGQLVLIHGGGSGIGTHAIQVARQRGARVAVTAGSAEKLERCRELGADVLINYREQDFVEVVRAQESGAGAAGADIILDNMGAAYLGRNVAALAPHGHLVIIGMQGGVTGELNVGALLGKWGSVHATNVRNRPATGTGSKAEIIAEVRRHLWPLVADGAVVPVIHAEFDIADAAQAHRVLDSSRAFGKVVLRVREE GT:EXON 1|1-334:0| BL:SWS:NREP 1 BL:SWS:REP 1->331|QORX_HUMAN|1e-52|37.7|326/332| SEG 67->78|gvvaevgegvre| SEG 115->125|aaaaglpevaa| SEG 206->212|gagaaga| BL:PDB:NREP 1 BL:PDB:REP 1->331|2j8zA|1e-55|38.4|323/330| RP:PDB:NREP 1 RP:PDB:REP 1->331|2c0cA|7e-45|22.2|325/353| RP:PFM:NREP 2 RP:PFM:REP 28->106|PF08240|2e-05|50.0|78/108|ADH_N| RP:PFM:REP 151->256|PF00107|9e-13|41.7|103/128|ADH_zinc_N| HM:PFM:NREP 3 HM:PFM:REP 151->269|PF00107|2.2e-27|36.2|116/130|ADH_zinc_N| HM:PFM:REP 28->87|PF08240|4.5e-16|46.7|60/109|ADH_N| HM:PFM:REP 110->169|PF10686|4.8e-06|28.8|59/71|DUF2493| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF08240|IPR013154| GO:PFM GO:0008270|"GO:zinc ion binding"|PF00107|IPR013149| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00107|IPR013149| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00107|IPR013149| RP:SCP:NREP 2 RP:SCP:REP 1->114|1iyzA1|8e-28|41.6|101/131|b.35.1.2| RP:SCP:REP 126->293|1o89A2|6e-19|18.4|158/177|c.2.1.1| HM:SCP:REP 1->147|1xa0A1|1e-43|47.5|141/0|b.35.1.2|1/1|GroES-like| HM:SCP:REP 112->297|1vj1A2|1.8e-42|40.2|174/0|c.2.1.1|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 3403 OP:NHOMOORG 776 OP:PATTERN 11----113333333---1--1--21112-22------------------21----------111-22 3652J212333131976CC-C755GDCCCCCA888837FF273663311431443314--6822B5FB954----------1611111-------------3-2-9-421------------------------1-11132---9-54241121111------1-152555------------33233---3-3888888782686767-223-1757121136511111245---------------3--112-2-11-1---762211311323--11111111-11-----------111-11111--111--------1-1--2--------------------------------------------13-5C6631111184A682259598634444342445-7A986B676C719775767ABBA88B353442424442622222222444-443311111--------------------11111466422645889ABB9866666679666546D5E8IFA-144353323865484222-12132--1--1-1-342211----1----111-3312213-14456CC-1-------------------------11111421234111111121-111111-1122---1211------3115-311112122111-11111-111111111111147432222111111111111111151111111--222222222222----11-111111133741111---------11112131212142796769CC787AA6986----------1--1-----2----23324231221------1551122----------------------------------------------23- --11563-531-2276AC999BALNKB8845659956777376665ADAMBCPM9AB9778781132--113-11212-21----143-CJ9A49531325-3434-695B7A8666442537665495Ij81B984334836B4275349239596575612C751635C215C1-12K2135CB7F6B5B12I8993 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 334 STR:RPRED 100.0 SQ:SECSTR EEEEEEccccccHEEEEEEEEcccccTTEEEEEEEEEEccTTHHHHHTTTTcTTccccEEcccEEEEEEEEEcTTGGGTccTTcEEEEEcccccccEEEEEGGGcEEcccccHHHHHHTTTTHHHHHHHHHHHHTcccTTcEEEETTTTcTTHHHHHHHHHHTTcEEEEEEccHHHHHHHHHTTccEEEETTTccHHHHHHHHTTTHcTTcEEEEEEcccTHHHHHHHHHEEEEEEEEEcccGGGTTcccHHHHHHHHTcEEEEccGGGcGGGHHHHHHHHHHHHHTTcccccEEccTTcTTcccccTTHHHHHHHHHHTTccccEEEEEcccc PSIPRED cEEEEEcccccccEEEEEEEccccccccEEEEEEEEEEccHHHHHHHcccccccccccccccccEEEEEEEEcccccccccccEEEEEcccccEEEEEEEcHHHEEEccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHccccEEEEcccccHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHccEEEEEEEEEEHHHHccHHHHHHHHHHHHHHHHHHHccccccccEEEEcHHHHHHHHHHHHccccccEEEEEEccc //