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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55065.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  418/915 : Eukaryota  179/199 : Viruses  0/175   --->[See Alignment]
c.1.4
:391 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   63->387 1tb3A PDBj 8e-44 39.5 %
:RPS:PDB   24->387 2e77B PDBj 3e-32 27.5 %
:RPS:SCOP  24->388 1al7A  c.1.4.1 * 3e-27 32.4 %
:HMM:SCOP  23->390 1huvA_ c.1.4.1 * 9.3e-82 38.9 %
:RPS:PFM   63->387 PF01070 * FMN_dh 3e-54 47.1 %
:HMM:PFM   34->388 PF01070 * FMN_dh 1.8e-122 45.9 351/355  
:BLT:SWISS 1->375 LA2M_MYCSM 9e-73 42.4 %
:PROS 285->291|PS00557|FMN_HYDROXY_ACID_DH_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55065.1 GT:GENE BAD55065.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 234630..235805 GB:FROM 234630 GB:TO 235805 GB:DIRECTION + GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD55065.1 LENGTH 391 SQ:AASEQ MSSFIDFQNEIYLAGLGGRIPELPMTPEGLEERAREVLGASEFAYVAGSASSGRTAAANRAAFDRYRIVPRMLRGATGPGNRDLSTEVLGTRLAAPVLTAPIGVLELMRPGGEVTVAEVTKELGIGSVLSTASSSTIEEVGAAAGDWWYQLYWPADHDLARSFVERAERAGAKAIMVTVDTPSLGWRPQDLELAHLPFLVGKGIANYLSDPVFRAKLPSPPEESEDAMRIAILTWVGLFGNHTLRPADIARLREWTDLPIAVKGILHPDDARAVIDAGADGVVVSNHGGRQVDNSIAALDALPAVVSAIGDRADVLFDSGIRTGSDVLVALSLGAKAVLFGRPYAYGLGIAGRAGVHHALRLLLADFDSAMGLCGCTSAAALDRSLIATPH GT:EXON 1|1-391:0| BL:SWS:NREP 1 BL:SWS:REP 1->375|LA2M_MYCSM|9e-73|42.4|370/394| PROS 285->291|PS00557|FMN_HYDROXY_ACID_DH_1|PDOC00482| SEG 47->62|agsassgrtaaanraa| SEG 269->284|ddaravidagadgvvv| BL:PDB:NREP 1 BL:PDB:REP 63->387|1tb3A|8e-44|39.5|286/332| RP:PDB:NREP 1 RP:PDB:REP 24->387|2e77B|3e-32|27.5|345/368| RP:PFM:NREP 1 RP:PFM:REP 63->387|PF01070|3e-54|47.1|297/328|FMN_dh| HM:PFM:NREP 1 HM:PFM:REP 34->388|PF01070|1.8e-122|45.9|351/355|FMN_dh| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01070|IPR000262| RP:SCP:NREP 1 RP:SCP:REP 24->388|1al7A|3e-27|32.4|343/350|c.1.4.1| HM:SCP:REP 23->390|1huvA_|9.3e-82|38.9|350/0|c.1.4.1|1/1|FMN-linked oxidoreductases| OP:NHOMO 1299 OP:NHOMOORG 601 OP:PATTERN -----------------------1----1--1-----------------------------1------ --3141-111111-24422-22113322222222224252-3232111----1111-3--212-31512-1-----------3-----------------1---1---------------------------------------21-1-------------------1112--11-----11-1211----1-----------------------------1---------1-------------------------12--1-111--222-1---1-----1------11111-111111111111111111-----------11--1111111-1--1---1111------1---------12--------11-1221-11111-3221111111111111111111---1--1-3232-333333133335412212351111323---------111-1-------------------------------11241-23232-1121-3333222133333-3--51331-1---1223363212211---1---111111111--3---2-1111-11--1----1----------1--1-1----------------------------1-1-1----------------------------------11---1-1111122111-111111111111111111122211121211222122122222211111111---11111111111---------------122111-1-11111---111111111121122221--221111---1212222221-----11111-11--1111111111-------1111111------------------------------------------------- ----11------1116A68A876CDDC332444233243434443455579CKF24532444233-23211241221-1121111211-7F5A3736452412112-1--L222224222221222232573-22322222225122212222422223332-5121223-32621112H-211154A77722242216 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 368 STR:RPRED 94.1 SQ:SECSTR #######################ccccTHHHHHHHTTccHHHHHHHHcccTTcHHHHHHHHGGGGEEEcccccccccEcccccccEEETTEEEcccEEEcccccGGGTcTTHHHHHHHHHHHHTccEEEETTccccHHHHHHHHTTcEEEEcccccHHHHHHHHHHHHHHTcccEEEEcccccccccHHHHHTTcccccccTTTGGGTTccGGGcccTTcccTcccTTTHHcHHHHHHHccccccHHHHHHHHHHHcccEEEEEEccHHHHHHHHHTTccEEEEccGGGTcccccccHHHHHHHHHHHHTTcccEEEccccccHHHHHHHHHTTccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccHHHHTTccEEEcc DISOP:02AL 219-228| PSIPRED cccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccEEcEEEEEccEEcccHHHHHHHHHHHHcccHHHHHHHHHHHHcccEEEEcccccccHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHccccEEEEEcccccccccHHHHHHccccHHHHHHHHHHHccHHHHHHccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHcccccccccc //