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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55072.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  27/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.213.1
:242 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->241 2nsfA PDBj 2e-23 32.9 %
:RPS:PDB   9->150 3e4xA PDBj 7e-10 16.1 %
:RPS:SCOP  3->153 2nsfA1  a.213.1.4 * 4e-14 35.1 %
:HMM:SCOP  14->163 1rxqA_ a.213.1.1 * 1.3e-06 22.9 %
:RPS:PFM   19->149 PF11716 * MDMPI_N 2e-04 32.8 %
:HMM:PFM   18->154 PF11716 * MDMPI_N 8.2e-29 33.3 135/140  
:HMM:PFM   161->239 PF07398 * MDMPI_C 1.6e-09 30.1 73/82  

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55072.1 GT:GENE BAD55072.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(241779..242507) GB:FROM 241779 GB:TO 242507 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55072.1 LENGTH 242 SQ:AASEQ MTSDAHDLTPRTTLDQVAASTARLLETVRDLTDADLTAASPLPGWTRGHVVTHLARNADSLVNLLIWARTGVEIAQYPSTFLRDFDIDAGAPRPAEQQVLDLEAAVTRFTALADSAPPDAWGAVVRTRQGRPIAAAEIAWMRLLEVEIHHVDLGVDYTPDDWPNTFVARALPGVATDLAKAVSPDTEAFDLQATDTPFTATLGTGAPVHTVAGTSAHLLAWLLGRSTGESLSGPLPELPAWR GT:EXON 1|1-242:0| BL:PDB:NREP 1 BL:PDB:REP 6->241|2nsfA|2e-23|32.9|231/240| RP:PDB:NREP 1 RP:PDB:REP 9->150|3e4xA|7e-10|16.1|124/149| RP:PFM:NREP 1 RP:PFM:REP 19->149|PF11716|2e-04|32.8|122/127|MDMPI_N| HM:PFM:NREP 2 HM:PFM:REP 18->154|PF11716|8.2e-29|33.3|135/140|MDMPI_N| HM:PFM:REP 161->239|PF07398|1.6e-09|30.1|73/82|MDMPI_C| RP:SCP:NREP 1 RP:SCP:REP 3->153|2nsfA1|4e-14|35.1|151/160|a.213.1.4| HM:SCP:REP 14->163|1rxqA_|1.3e-06|22.9|144/174|a.213.1.1|1/1|DinB/YfiT-like putative metalloenzymes| OP:NHOMO 33 OP:NHOMOORG 27 OP:PATTERN -------------------------------------------------------------------- ---11--1111-------------------------1122-111--------2121----1111212111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 231 STR:RPRED 95.5 SQ:SECSTR #####GGccHHHHHHHHHHHHHHHHHHHHTccGGGTGTccccTTccHHHHHHHHHHHHHHHHHHHHHHHHHTcGGGGGccHccccccHHHccccccccHHHHHHHHHHHHHHHHHTcTTGGGcEEEEHHHHcEEEHHHHHHHHHHHHHHHHHTcccccGGGccHHH####HHHHHHHHHHHHHHTTccTTEEEEETT#TTEEEEcccccEEEEcHHHHHHHHTTcccTEETTccccccccc# DISOP:02AL 1-2, 239-242| PSIPRED ccccccccccccHHHHHHHHHHHHHHHHHccccHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEccHHHHHccHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccEEccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccEEEEccHHHHHHHHHccccccccccccccccccc //