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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55076.1
DDBJ      :             putative DNA cytosine methyltransferase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  151/915 : Eukaryota  11/199 : Viruses  6/175   --->[See Alignment]
c.66.1
:382 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   27->167 2c7rA PDBj 1e-13 30.4 %
:RPS:PDB   31->291 2c7oA PDBj 5e-23 21.3 %
:RPS:SCOP  31->290 10mhA  c.66.1.26 * 3e-40 23.4 %
:HMM:SCOP  1->295 6mhtA_ c.66.1.26 * 1.3e-51 33.5 %
:RPS:PFM   27->286 PF00145 * DNA_methylase 1e-23 33.2 %
:HMM:PFM   5->168 PF00145 * DNA_methylase 8.3e-42 37.0 162/335  
:BLT:SWISS 26->376 YDIP_BACSU 1e-90 52.7 %
:PROS 65->77|PS00094|C5_MTASE_1
:PROS 268->286|PS00095|C5_MTASE_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55076.1 GT:GENE BAD55076.1 GT:PRODUCT putative DNA cytosine methyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(244229..245377) GB:FROM 244229 GB:TO 245377 GB:DIRECTION - GB:PRODUCT putative DNA cytosine methyltransferase GB:PROTEIN_ID BAD55076.1 LENGTH 382 SQ:AASEQ MTGGRMVGLFAGIGGLELGLAAHGWTCELLCEIDPGAQAVLGARFPDTDLHADITALRAVPAGTELVAAGFPCQDLSQAGRTAGITGLRSGLVDEVFRLVRRKRGPRWLLIENVPFMLQLGRGAAMRHITTALEDLGYTWAYRVVDARAFGLPQRRQRVLMLASRTEDPRPVLFGEDAGEAVVGDPDRDPCGFYWTEGVRGLGWAVNAVPTLKGGSGLGIASPPAVRLPSGEIVTPGIVDGERLQGFAADWTAPAVTVPGIRQGHRWKLVGNAVSVRMADWVGARLAAPLEPIPHDVPLAPGTPWPSAAWGRAGSAYRVPVSTWPVRAPYEDLKNFLTDSRLLSARATAGFLRRASRGSLRFPDGFLEDVASHLDRMGGWAA GT:EXON 1|1-382:0| BL:SWS:NREP 1 BL:SWS:REP 26->376|YDIP_BACSU|1e-90|52.7|347/389| PROS 65->77|PS00094|C5_MTASE_1|PDOC00089| PROS 268->286|PS00095|C5_MTASE_2|PDOC00089| SEG 8->24|glfagigglelglaahg| BL:PDB:NREP 1 BL:PDB:REP 27->167|2c7rA|1e-13|30.4|138/327| RP:PDB:NREP 1 RP:PDB:REP 31->291|2c7oA|5e-23|21.3|253/327| RP:PFM:NREP 1 RP:PFM:REP 27->286|PF00145|1e-23|33.2|247/302|DNA_methylase| HM:PFM:NREP 1 HM:PFM:REP 5->168|PF00145|8.3e-42|37.0|162/335|DNA_methylase| GO:PFM:NREP 2 GO:PFM GO:0003677|"GO:DNA binding"|PF00145|IPR001525| GO:PFM GO:0006306|"GO:DNA methylation"|PF00145|IPR001525| RP:SCP:NREP 1 RP:SCP:REP 31->290|10mhA|3e-40|23.4|252/328|c.66.1.26| HM:SCP:REP 1->295|6mhtA_|1.3e-51|33.5|284/327|c.66.1.26|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 247 OP:NHOMOORG 171 OP:PATTERN ----------------------------------1----------1--------------------1- -1------11-1------------1--------1-11112-1--------------1---------1----2111111----------------------1-2------1---------------------1-------11---1--21-457----------1---13-2---------1-------------------2--1---3-1----11-----1-------1-----------------------1-------------------------211---1---1--11212--1----2---1----111--12-1------1-11--11--3111--1---112---2-1-1----------------------------------1-11-----------1-----2----------------1----1---1-------1--------1---------------------21------------------------------------1-------1-1-------------1---------------13321322-1--------1---2---2----------1-1------1-1-----1----21122123-------------1------------------2--1--------------11---------13-------------------------------------------------------------------------------11-111-1-------1-113-3----1-1--------------1----------------------------------1-211--11-------------------------------1------------------------------ -------------1----------------------------------------------------------------------------------------------4---------------------------------------------------------------------44333122--------1---- ---------------------------------------------------------------------------------------------1-1------11-----------------------1-----------------------1----------------------- STR:NPRED 269 STR:RPRED 70.4 SQ:SECSTR ########################cEEEEEEcccHHHHHHHHHHHccccccccGGGccGGGccccEEEEEcccTTTcTTccccGGGcTTccHHHHHHHHHHHHc#ccEEEEEEEGGGGTTTTTHHHHHHHHHHHHTTcccEEEEEEGGGGTcccccEEEEEEEEcGGGcccccccccHHHHcccGGGcGGGccccTTcEEcccccccccccccEEEEcTTccTTcEEEETTccccccHHHHHHHTTccTTcccccTccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHccc######################################################################################## DISOP:02AL 297-298, 301-302| PSIPRED ccccEEEEEEccHHHHHHHHHHcccEEEEEEEccHHHHHHHHHHccccEEEEEEcccccccccccEEEEccccccccccccccccccccccHHHHHHHHHHHHccccEEEEEccHHHHcccccHHHHHHHHHHHHcccEEEEEEEcHHHccccccccEEEEEEEEccccccccccccHHHHHcccccccccccHHHccccccccccccccEEEcccccccccccccccccccEEEEcHHHHHHHcccccccEEcccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHccccccccHHHccccEEEEccHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccc //