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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55098.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:319 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->72 3f52E PDBj 4e-05 42.1 %
:RPS:PDB   3->62 2axvB PDBj 5e-07 16.9 %
:RPS:SCOP  3->53 1y7yA1  a.35.1.3 * 5e-07 33.3 %
:HMM:SCOP  3->57 2b5aA1 a.35.1.3 * 2.3e-05 29.1 %
:HMM:PFM   6->48 PF01381 * HTH_3 9.2e-06 27.9 43/55  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55098.1 GT:GENE BAD55098.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(258880..259839) GB:FROM 258880 GB:TO 259839 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD55098.1 LENGTH 319 SQ:AASEQ MTGELLRELRCAAGIGLRRMAAQTHYTPSYLSLVETGRRPVTEGVLDRYRAVLSDPVLDGVDVHRLGATVADPSGAGAAGVADLSVILGKTRHLEDTVGAAAVTPLVRGMDSTARELARYRSGGTAAAGLASAVARYRGWLEHDTGQPRVADRVLTDAARLAEYADDQSQLAHALSFRAYTARHMGDLRRALDLTDAALGVTRAHPILAVYDRYQRAELLALDDDTGAAARALAVADRAAEEAERFDLPTFGYWYTPGFWGLERGVVLAAMGRHADAVREAEQGHAALPAEHQSAGWARSMLEQVEPGMAEQVELEMAD GT:EXON 1|1-319:0| SEG 123->135|ggtaaaglasava| SEG 187->199|dlrraldltdaal| SEG 217->245|aellaldddtgaaaralavadraaeeaer| BL:PDB:NREP 1 BL:PDB:REP 3->72|3f52E|4e-05|42.1|57/78| RP:PDB:NREP 1 RP:PDB:REP 3->62|2axvB|5e-07|16.9|59/303| HM:PFM:NREP 1 HM:PFM:REP 6->48|PF01381|9.2e-06|27.9|43/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 3->53|1y7yA1|5e-07|33.3|51/69|a.35.1.3| HM:SCP:REP 3->57|2b5aA1|2.3e-05|29.1|55/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 3 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- ------------------------------------2-----------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 72 STR:RPRED 22.6 SQ:SECSTR ccHHHHHHHHHHHTccHHHHHTTTTccHHHHHHHHTTcccccHHHHHHHHHHHTccHHHHHHHHHHTccHHH####################################################################################################################################################################################################################################################### DISOP:02AL 1-3, 66-74, 318-319| PSIPRED ccHHHHHHHHHHHcHHHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccccEEEcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcHHHHHHHHHHccc //