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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55106.1
DDBJ      :             putative ABC transporter
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
c.37.1f.37.1
:639 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   22->629 2hydA PDBj 9e-77 31.1 %
:RPS:PDB   135->629 3b60A PDBj 1e-80 33.3 %
:RPS:SCOP  22->377 2hydA2  f.37.1.1 * 2e-56 19.4 %
:RPS:SCOP  395->628 1b0uA  c.37.1.12 * 7e-42 22.6 %
:HMM:SCOP  15->381 1pf4A2 f.37.1.1 * 1.6e-84 33.8 %
:HMM:SCOP  375->616 1pf4A1 c.37.1.12 * 3.4e-66 35.5 %
:RPS:PFM   135->345 PF00664 * ABC_membrane 6e-25 28.4 %
:RPS:PFM   413->444 PF02367 * UPF0079 2e-04 53.1 %
:RPS:PFM   436->561 PF00005 * ABC_tran 7e-13 44.1 %
:HMM:PFM   36->350 PF00664 * ABC_membrane 2.6e-54 27.7 274/275  
:HMM:PFM   436->561 PF00005 * ABC_tran 3.9e-22 33.6 113/118  
:HMM:PFM   409->454 PF03193 * DUF258 4.1e-06 28.9 45/161  
:BLT:SWISS 18->627 Y1303_MYCBO e-168 55.1 %
:PROS 533->547|PS00211|ABC_TRANSPORTER_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55106.1 GT:GENE BAD55106.1 GT:PRODUCT putative ABC transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 270981..272900 GB:FROM 270981 GB:TO 272900 GB:DIRECTION + GB:PRODUCT putative ABC transporter GB:PROTEIN_ID BAD55106.1 LENGTH 639 SQ:AASEQ MRPGGPVPGAPDAKPKSFKPSLKRLLGRLAPERFYVWCIVVLAIVSVVLNTLGPYLLGKATNIVFDGVVGKNLEQMRGLSKEEAVERLRDSGNDTLADMLSAMNVVPGVGVDFTAVGRVLLVVLALYLAAALFSWLQAYLLNIVINRTVKRLRSDIEDKIHRLPLRYFDSQPRGDVLSRVTNDVDNVSQSLQQTMSQLLMSVFSVLGILIMMFWISPLLAVIALLTVPAAIVVTAQIAKRSKPHFVNQWKYTGLVNAQVEEAYTGHEVITAFGRNREVGEEFDQRNDKLYESSFKAQFISGLIMPSIMFLGNVNFVLVALVGGLRVATGQLSLGEVQAFIQYSRQFSQPLTQIGTMVNLLQSGVASAERIFEILDAEEQSPDPQLPDVRPLDRGRVEFEAVSFRYEPDKPVIERLSLVAEPGHVVAIVGPTGAGKTTLVNLLMRFYELDAGTITIDGVDITRMSRDALRSRIGMVLQDTWLFRGTIRENIAYGNPNASEEEILAAARAAYVDRFVHALPDGYDTMIDEEGSGVSAGEKQLITIARAFLAKPSILILDEATSSVDTRTELLVQQATAALRRDRTSFVIAHRLSTIRDADLIVVMEAGRIVEHGTHQRLLEERGAYYRLYNAQFAAAAAEA GT:EXON 1|1-639:0| BL:SWS:NREP 1 BL:SWS:REP 18->627|Y1303_MYCBO|e-168|55.1|606/631| PROS 533->547|PS00211|ABC_TRANSPORTER_1|PDOC00185| TM:NTM 5 TM:REGION 32->54| TM:REGION 125->147| TM:REGION 192->214| TM:REGION 217->238| TM:REGION 299->321| SEG 115->132|avgrvllvvlalylaaal| SEG 188->201|sqslqqtmsqllms| SEG 316->327|vlvalvgglrva| SEG 630->638|aqfaaaaae| BL:PDB:NREP 1 BL:PDB:REP 22->629|2hydA|9e-77|31.1|572/578| RP:PDB:NREP 1 RP:PDB:REP 135->629|3b60A|1e-80|33.3|493/572| RP:PFM:NREP 3 RP:PFM:REP 135->345|PF00664|6e-25|28.4|211/274|ABC_membrane| RP:PFM:REP 413->444|PF02367|2e-04|53.1|32/123|UPF0079| RP:PFM:REP 436->561|PF00005|7e-13|44.1|111/123|ABC_tran| HM:PFM:NREP 3 HM:PFM:REP 36->350|PF00664|2.6e-54|27.7|274/275|ABC_membrane| HM:PFM:REP 436->561|PF00005|3.9e-22|33.6|113/118|ABC_tran| HM:PFM:REP 409->454|PF03193|4.1e-06|28.9|45/161|DUF258| GO:PFM:NREP 7 GO:PFM GO:0005524|"GO:ATP binding"|PF00664|IPR001140| GO:PFM GO:0006810|"GO:transport"|PF00664|IPR001140| GO:PFM GO:0016021|"GO:integral to membrane"|PF00664|IPR001140| GO:PFM GO:0042626|"GO:ATPase activity, coupled to transmembrane movement of substances"|PF00664|IPR001140| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00664|IPR001140| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 22->377|2hydA2|2e-56|19.4|320/323|f.37.1.1| RP:SCP:REP 395->628|1b0uA|7e-42|22.6|230/258|c.37.1.12| HM:SCP:REP 15->381|1pf4A2|1.6e-84|33.8|311/311|f.37.1.1|1/1|ABC transporter transmembrane region| HM:SCP:REP 375->616|1pf4A1|3.4e-66|35.5|242/244|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 41508 OP:NHOMOORG 1174 OP:PATTERN LKA3BAC7EFECEBFAVCDE8EBNkNQXdRcPF7D9C8DCCB8PWMRcFNziZ7FLHELGGFG7N145 OOdG*XRYkkjMTNPQSML-LY99W*NNNNNOdedeo***FqR*lypckaTMpnpLQcBBoosc*av***VUTTTkVUcJ*dV96B99LMFG2DBEF--ADKHDHTGRMO344444446644449PKGRXKJSRSOVeesyCCGtQiVYiQQbRRTTPEHGMITXTdz**OERCFGGFMFFFDTOPGEgb7RXl********s********nnmv***Yal*vgiorsopp**UXXYYYXWYYYYXYWSYVTTtiUay*bNeXlnmKL**aQMWgbcacjjnpmjmrprkomkhglojmlUXVUVVXXXWWUWwnlfddmmnfg*nyz******zW*YhswwPZYW*bdoi*edMG**kZUTcUNVeTacKQRTGVOMMKILHGKVM***ZRg****ryzxz*u*sty*-gn*gX*j***OB**************IGL********v*QPQQQQQQkRWHNdRs65655666756867AB68886977A85A6FADIEDx**q*u****yiihjeuu**toppUsxu*sv*r8GjlgtWiYa*m****QYWEOCJYMFIFFGEGMKHRcVOl*NaPdWOWjPPTBVUVPPSbPZMKNJioQoFGDJACDDEBC7598A89999JACFJHheoPdIOGLGjLPTTNIOSONNRMRUTSVS5-DIOJH322222zl*xOxiosrvpuqvlk-qnnnqosmpqrwqklnkkl*****feVkngihlkkjkkhkiij*hfhkkilM4ttvuyxutuwyw33DB9C89AKNOMJCvb*QPOTUUEMOLKMJLXLMNLMDMEJOfZafecm*r*hothjV*z*AAA8AAA9AFVccrdefedoppnoNOPJLKJJKMDCCC43JNFFBCAC56544454*9RA8859-55A3AB8BDA78F946778QYZNJbtdcb9SH 6666daO-fM98YbbMTVNVVdaneqaOOFIJKYXRJQQOPNLGGHdUWhfmspVTaPQOOQNHI9BC2KE8HGJHJ2IKEIGEPQ8A-aqGTVXVIIIMGDMabR6R*p*fjY*nxTKOMPdOusQ*L**l2sa*RNOKmRT*kITPOGiKJ*QYTXrSp*UzYYSnWf*ur*gHOJJ*AFDLK*tq*R**LK*x**i ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ DISOP:02AL 1-22, 377-392, 631-639| PSIPRED ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEEEcccccEEccccEEEcccEEEEEEccccccHHHHHHHHHHcccccccEEEEccEEcccccHHHHHHHccccccccEEEcccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccHHcccccccccccccHHHHHHHHHHHHHHHcccEEEEHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHccEEEEEEccEEEEEccHHHHHHcccHHHHHHHHHHHHHHccc //