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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55115.1
DDBJ      :             putative acyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  73/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.102.3
:310 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  91->152 1cb8A1  a.102.3.2 * 7e-04 19.6 %
:RPS:PFM   60->297 PF03279 * Lip_A_acyltrans 4e-18 37.1 %
:HMM:PFM   18->297 PF03279 * Lip_A_acyltrans 8.9e-72 33.9 274/295  
:PROS 234->245|PS00141|ASP_PROTEASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55115.1 GT:GENE BAD55115.1 GT:PRODUCT putative acyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 280956..281888 GB:FROM 280956 GB:TO 281888 GB:DIRECTION + GB:PRODUCT putative acyltransferase GB:PROTEIN_ID BAD55115.1 LENGTH 310 SQ:AASEQ MTRQHQPENGPAHTAAARGWDLAYAAGWRLVRALPERWAMWLFLAAADRAARDGGPAQLRRNLARVLAVAPDRVPDDLVRASLRSYARYWCEAFRLPSMDPVRLAERIENSATGLDHIHDAVAGGRGVILALPHSGNWDLAGVWLVQRVGTPTVVAERLAPESLFRRFVRFRERLGFEIIPLTGGATAPFEQLAVRLRQGRVVGLLGERDLTATGVPVSFFGEPARMPAGPARLAIDTGAPLLPVHCWFTPDGWGFSVGAPLDTGGGVQPTTQALADHFAAGIAAHPADWHMLQPLWTADRRRREHRPGT GT:EXON 1|1-310:0| PROS 234->245|PS00141|ASP_PROTEASE|PDOC00128| SEG 45->55|aaadraardgg| SEG 164->178|lfrrfvrfrerlgfe| RP:PFM:NREP 1 RP:PFM:REP 60->297|PF03279|4e-18|37.1|232/282|Lip_A_acyltrans| HM:PFM:NREP 1 HM:PFM:REP 18->297|PF03279|8.9e-72|33.9|274/295|Lip_A_acyltrans| GO:PFM:NREP 3 GO:PFM GO:0008415|"GO:acyltransferase activity"|PF03279|IPR004960| GO:PFM GO:0009244|"GO:lipopolysaccharide core region biosynthetic process"|PF03279|IPR004960| GO:PFM GO:0016021|"GO:integral to membrane"|PF03279|IPR004960| RP:SCP:NREP 1 RP:SCP:REP 91->152|1cb8A1|7e-04|19.6|46/310|a.102.3.2| OP:NHOMO 75 OP:NHOMOORG 73 OP:PATTERN -------------------------------------------------------------------- --11111111111111111-11111111111111112111111111--1-----------11--11-1111-111---------------------------------------------------------------------11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--21---1-----11-------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111--------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-10, 305-310| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccEEEEccHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHccEEEEcccccHHHHHHHHHHHHcccEEEEEcccccccccEEEEccccccHHHHHHHHHHHHHcccEEEEEEEEEcccEEEEEEccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccc //