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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55116.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  74/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.96.1c.1.8c.67.1
:429 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->421 3d6kD PDBj e-101 51.0 %
:RPS:PDB   74->422 3d6kB PDBj 3e-28 49.0 %
:RPS:SCOP  149->266 1fhlA  c.1.8.3 * 5e-10 13.4 %
:RPS:SCOP  289->415 1xqoA  a.96.1.6 * 9e-30 15.8 %
:HMM:SCOP  5->418 1wstA1 c.67.1.1 * 1.2e-42 26.4 %
:RPS:PFM   74->412 PF00155 * Aminotran_1_2 3e-10 30.2 %
:HMM:PFM   68->400 PF00155 * Aminotran_1_2 1.7e-13 23.7 300/363  
:BLT:SWISS 141->411 YDFD_BACSU 1e-08 25.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55116.1 GT:GENE BAD55116.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 282453..283742 GB:FROM 282453 GB:TO 283742 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55116.1 LENGTH 429 SQ:AASEQ MPRQTQIGLMSRDELVSEHETQSANYAKLKTEKLTLDLTRGKPSPEQLDLSAALLSLPGDGDYRDGTGTDCRNYGGLHGLPELRAIFGELLNIPVDNLLAGNNASLELMHDVITYAMLYGTNDSERRWADEPVLKFLCPAPGYDRHFAITEALGIEMIPVPMLHDGPDTHKIAELLAADPAIKGLWAVPNYSNPTGVVFSEEVVRELVSMPAAAPDFRLFWDNAYAVHPLTDTAAPVYDVLGMAAEAGHPNRPIVFASTSKITFAGAGVSFLGGSTANLEWYLGHAAKKSIGPDKINQLRHLRFFGDADGVRAHMQKHRAILEPKFALVRRILEDRLGASKVASWTEPKGGYFISLDVLEGTASRVIALAKDAGIALTAAGSAFPYRKDPEDKNIRIAPSFPKLPELEKAMDGLATCVLLAATEKLLEK GT:EXON 1|1-429:0| BL:SWS:NREP 1 BL:SWS:REP 141->411|YDFD_BACSU|1e-08|25.1|247/482| SEG 28->39|klktekltldlt| SEG 59->70|gdgdyrdgtgtd| BL:PDB:NREP 1 BL:PDB:REP 15->421|3d6kD|e-101|51.0|396/402| RP:PDB:NREP 1 RP:PDB:REP 74->422|3d6kB|3e-28|49.0|339/399| RP:PFM:NREP 1 RP:PFM:REP 74->412|PF00155|3e-10|30.2|305/341|Aminotran_1_2| HM:PFM:NREP 1 HM:PFM:REP 68->400|PF00155|1.7e-13|23.7|300/363|Aminotran_1_2| GO:PFM:NREP 3 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00155|IPR004839| GO:PFM GO:0016769|"GO:transferase activity, transferring nitrogenous groups"|PF00155|IPR004839| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00155|IPR004839| RP:SCP:NREP 2 RP:SCP:REP 149->266|1fhlA|5e-10|13.4|112/334|c.1.8.3| RP:SCP:REP 289->415|1xqoA|9e-30|15.8|114/253|a.96.1.6| HM:SCP:REP 5->418|1wstA1|1.2e-42|26.4|382/0|c.67.1.1|1/1|PLP-dependent transferases| OP:NHOMO 77 OP:NHOMOORG 77 OP:PATTERN -------------------------------------------------------------------- -----11111111111111-11111111111111111111--------1--1--11------11-11-----------1111---------------------------------------------------------11------------------------------------------111-----------------------1---1-------------------1--------------------------------------------------------------------------------------------------------1-11----1-----11--------------------------------1-----------------------1111111----------------------------------------------------------------------------------------------1-------1--------------------------------------------------------------------------------1----------------------------------1----------------------------------------1---------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------ --------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 415 STR:RPRED 96.7 SQ:SECSTR ##############HHHHHHHHHHHHHHHHHTcccEEcccHHTTcccEEcccccccccccHHHHHHHHHHTTccccccccHHHHHHHHHHHTccGGGEEEccccHHHHHHHHHHHHHHHccTTccccGGGccccEEEEEEcccHHHHHHHHHTTcEEEEEETTEEcHHHHHHHHHHHTTcTTEEEEEcccccTTTcccccHHHHHHHHHcHcccTTcEEEEEcTTTTccccccccccccHHHHHHHHHTcTTcEEEEEcTTTccTTcccEEEEccHHHHHHHHHHHHHHcccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGccEEEccccccccEEEEEcTTcHHHHHHHHHHTTEEcccTTTTcGGGccTTccEEEEccccccHHHHHHHHHHHHHHHHHHcccccEEH DISOP:02AL 1-4, 7-9| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHccccEEEccccccccccccHHHHHHHHHHccccHHHHHHHHHccccccccHHHHHHHHHHHccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHccEEEEEEcccccccHHHHHHHHHHccccEEEEEEccccccccccccHHHHHHHHHHHHHccccEEEEEccccHHHccccccccHHHHHHHHHccccccEEEEccHHHHHHHHHHHEEEEccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccEEEEEEEccccHHHHHHHHHHHcccEEEEccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHc //