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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55124.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.233.1
:538 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  85->139 1gpqA  d.233.1.1 * 5e-06 14.5 %
:RPS:PFM   275->358 PF09972 * DUF2207 7e-05 32.5 %
:HMM:PFM   227->490 PF09972 * DUF2207 7.1e-18 22.8 250/511  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55124.1 GT:GENE BAD55124.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(289995..291611) GB:FROM 289995 GB:TO 291611 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55124.1 LENGTH 538 SQ:AASEQ MLTFRGAAASALLLAAAASVAAAPVAQAQPAPAGVVITADLVLDREGVLRVEETVSVPEGAEFRMSLPLRLQVEPDVERRFRVTDVETGGVGSATTADDRFTLVAPPGESTFRYAVHNTVGDAPSSQVFHWLGVVDTDIAAISAALVAPSYELAIVDCTLGPPGNTRPCADVRTEAIGVLHLEQTDLRKGDAIDLTVQLPPGTVPANADVIDHSGPGPFSLSGPVLAAFGALLALLAGLAALVWRARRDNAAATTGSEVFDPLAREDGQVRFTAPDGVLPGEAGLLLDEHVDPVDIAATVVDLAVRRYLWVTQIADNDWRITRVNAPDDQLRDYEKAVYTALLPDGVDAVTMGELRGRVQAGPVRAAMIADAVARGAFVDRSRPGPAVWLGGALVVAGLAATVGLAVTAGYALVGVAILLAGVALVLLPKYLPARTAAGSRIAGRVRALQRGLDATRPEQIPPTDQETVFSRALPYTVVGGRADNWVRAFRQLNPAADAQPGLYWFGGYERDRDLHRFAAHFPYFITALEGLFSETSH GT:EXON 1|1-538:0| TM:NTM 5 TM:REGION 3->25| TM:REGION 134->156| TM:REGION 221->243| TM:REGION 386->408| TM:REGION 411->432| SEG 7->33|aaasalllaaaasvaaapvaqaqpapa| SEG 226->242|laafgallallaglaal| SEG 387->428|avwlggalvvaglaatvglavtagyalvgvaillagvalvll| RP:PFM:NREP 1 RP:PFM:REP 275->358|PF09972|7e-05|32.5|83/494|DUF2207| HM:PFM:NREP 1 HM:PFM:REP 227->490|PF09972|7.1e-18|22.8|250/511|DUF2207| RP:SCP:NREP 1 RP:SCP:REP 85->139|1gpqA|5e-06|14.5|55/127|d.233.1.1| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- --------------1---------------------1---------------------------1-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-7, 253-254, 535-538| PSIPRED ccEEccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEccccEEEEEEEEEccccccEEEEEEEEcccccccccEEEEEcccccccEEEEEEcccEEEEEccccHHHHHHHHHHHHcccccEEEEEEcccHHHHHHEEEEEEcccccHHHHHHccccccccccccccccHHHHHHHHHHHccccccEEEEEEEccccccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccccccEEEEEccccccccHHHHHHHccccEEHHHHHHHHHHHHcEEEEEEEccccEEEEEccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEHHHHHccEEEEcccHHHHHHHHHHcccHHHHcccEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccc //