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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55130.1
DDBJ      :             putative cyclopropane fatty acid synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  483/915 : Eukaryota  118/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:438 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   155->402 1kpiA PDBj 1e-32 36.8 %
:RPS:PDB   154->414 2eg5A PDBj 1e-34 11.1 %
:RPS:SCOP  163->421 1kp9A  c.66.1.18 * 3e-73 31.0 %
:HMM:SCOP  148->421 1kpgA_ c.66.1.18 * 7.4e-75 32.2 %
:RPS:PFM   152->417 PF02353 * CMAS 1e-65 49.1 %
:HMM:PFM   149->417 PF02353 * CMAS 4.4e-99 42.2 268/273  
:BLT:SWISS 20->431 YLP3_PSEPU 3e-66 41.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55130.1 GT:GENE BAD55130.1 GT:PRODUCT putative cyclopropane fatty acid synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(302879..304195) GB:FROM 302879 GB:TO 304195 GB:DIRECTION - GB:PRODUCT putative cyclopropane fatty acid synthase GB:PROTEIN_ID BAD55130.1 LENGTH 438 SQ:AASEQ MTTFKDRSDVFADLGTKLSIAEIFETLIDGEVPIRLTAYDGSSTGPADSRYSLDIRTPRGINYLATAPGDLGMARAYISGDMTAGGVHPGDPYEALKALQNMRFRRPSALALVTIARSLGWERLKPVAPPPQETLPRWRRIAFEGLRHTKGRDAEAIHHHYDVSNTFYEYVLGPSMTYTCAVYGDENWTLEQAQENKYRLIFDKLRLKEGDRLLDIGCGWGGMVRYAARRGVRVIGATLSAEQADWAQKKIAEEGLGDLAEVRHCDYRDVPETDFDAVSSIGLTEHIGVHNYPFYFGYIKSKLRDGGLFLNHCITRPDNTRSTKAGDFIDRYVFPDGELIGSGRIISDIQNVGLEVLHEENLREHYALTLHEWCKNLVANWDACVAEVGEGTAKVWGLYMAGSRLGFQRNVVQLHQVLGVKLPADGDWTVPLRPWWQP GT:EXON 1|1-438:0| BL:SWS:NREP 1 BL:SWS:REP 20->431|YLP3_PSEPU|3e-66|41.3|378/394| BL:PDB:NREP 1 BL:PDB:REP 155->402|1kpiA|1e-32|36.8|247/291| RP:PDB:NREP 1 RP:PDB:REP 154->414|2eg5A|1e-34|11.1|261/344| RP:PFM:NREP 1 RP:PFM:REP 152->417|PF02353|1e-65|49.1|265/271|CMAS| HM:PFM:NREP 1 HM:PFM:REP 149->417|PF02353|4.4e-99|42.2|268/273|CMAS| GO:PFM:NREP 1 GO:PFM GO:0008610|"GO:lipid biosynthetic process"|PF02353|IPR003333| RP:SCP:NREP 1 RP:SCP:REP 163->421|1kp9A|3e-73|31.0|258/270|c.66.1.18| HM:SCP:REP 148->421|1kpgA_|7.4e-75|32.2|273/285|c.66.1.18|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 1163 OP:NHOMOORG 601 OP:PATTERN -------------------------------------------------------------------- 1---41--111121388AA-A555B8A9AAA867771454-333---------23--2--112--121131-111111-----11----------------------------------------22-222111-2111-------1------11-----------2--1-------------111--------111111-21-21--2------1-------------------------------------11211111111221111111111-11111----------------------------------111-------121111111-1--1221111-1----------------------------2224-----112331113222211-11111112---1--1--242-2334122322222211111111111121111111151111-22-----------------------------222321211-11111115111122212222123221211-11231234242221132121-322----------121-121131-1----------121-111-1-3111----11111-1-1111111-----1111-121121111111111-111111--1-1----222------11132221111111111-111111111111111111122222111111111111111111121111111--111111111111---3-----111112221---------------22--2-211111111132222222221221-1-11-1---11111111111113322222222--------22----------------------------------------------------- ----131-2---3333344211143432222222222222122122653233431331334321111111--111------11111---57533662223224323-22------------------------------------------------------41------222-3223T33312434E4662161222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 387 STR:RPRED 88.4 SQ:SECSTR ##################################################cEEEEEEETTTEEEEEEEcHTTHHHHHHTcTHHHHTccHHHHHHHHHHHHHHTcEEEETTEEEEcHHHHHHHHccccccHHHHHHHHHHHHTTHcccTTTTTEEEETccccHHHHHHHHHHHHHHHHHccccccEEEEEEEccTTccHHHHHHTHHHHHHHHHHHHcccTTcEEEEEccccccccTTcEEEEEEEccTTccccccGGGTTcccTTcTTcccccTTccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEccccTTcccHHHHHHHcccccccccHHHHHHHHHHHccEEEEEEEEEEEETTTTcccTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTccEEEEEEEEEEEEEEEEcccccccccEEcTTcE# DISOP:02AL 1-11| PSIPRED ccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccEEcccccEEEEEEEcHHHHHHHHHcccHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHcccccEEEccccccccccHHHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccccEEEEEEccHHHcccccccEEHHHHHHHHHcHHHHHHHHHHHHHHcccccEEEEEEEEccccccccccHHHHHHHcccccccccHHHHHHHHHHcccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccccccccccccccc //