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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55131.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  43/915 : Eukaryota  106/199 : Viruses  0/175   --->[See Alignment]
d.145.1d.153.2d.58.32
:485 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   72->228 2qpmA PDBj 1e-15 31.2 %
:RPS:PDB   6->474 3bw7A PDBj 4e-31 21.2 %
:RPS:SCOP  51->208 1kuuA  d.153.2.1 * 3e-22 10.5 %
:HMM:SCOP  2->185 1w1oA2 d.145.1.1 * 1.3e-23 30.6 %
:HMM:SCOP  189->474 1e8gA1 d.58.32.1 * 7.8e-09 20.1 %
:RPS:PFM   63->151 PF01565 * FAD_binding_4 8e-10 39.3 %
:HMM:PFM   58->152 PF01565 * FAD_binding_4 2.5e-15 30.5 95/138  
:BLT:SWISS 68->480 DHC24_RAT 3e-30 28.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55131.1 GT:GENE BAD55131.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(304192..305649) GB:FROM 304192 GB:TO 305649 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55131.1 LENGTH 485 SQ:AASEQ MAVSLGKAGHTPAARESGYAAHRAGVDRLLASYRAIPPEATVRLAKKTSNLFRARAANPAPGLDVSGLTRVIAVDPEARTADVAGMTTYEDLVATTLPYGLAPLVVPQLKTITLGGAVTGLGIESTSFRNGLPHESVLEMDVLTGAGEILTVTPDGEHADLFRGFPNSYGTLGYTVRLKIELEPVPPYVALRHVRFHDLRELEAAIAAVVEDRSYDGERVDYLDGVVFTATESYLTLGRQTDEPGPVSDYTGMDIYYRSIQHDSPHPKRDRLTVHDYLWRWDTDWFWCSRAFGTQNPKIRRFWPKRYRRSSFYWKLVALDHKYHIGDKIEARKGNPPRERVVQDIEVPVERTADFVSWFLREIPIEPIWLCPLRLRAEGPAVSGAGAAGTRAWPLYPLERDRTYVNVGFWSAVPTVPGQPEGAANRAIERTVTEFDGHKSLYSDSYYDKDEFAALYGGDSYTELKKRYDPDQRLLDLYSKAVQRK GT:EXON 1|1-485:0| BL:SWS:NREP 1 BL:SWS:REP 68->480|DHC24_RAT|3e-30|28.2|383/516| BL:PDB:NREP 1 BL:PDB:REP 72->228|2qpmA|1e-15|31.2|154/496| RP:PDB:NREP 1 RP:PDB:REP 6->474|3bw7A|4e-31|21.2|443/497| RP:PFM:NREP 1 RP:PFM:REP 63->151|PF01565|8e-10|39.3|89/139|FAD_binding_4| HM:PFM:NREP 1 HM:PFM:REP 58->152|PF01565|2.5e-15|30.5|95/138|FAD_binding_4| GO:PFM:NREP 2 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01565|IPR006094| GO:PFM GO:0050660|"GO:FAD binding"|PF01565|IPR006094| RP:SCP:NREP 1 RP:SCP:REP 51->208|1kuuA|3e-22|10.5|153/202|d.153.2.1| HM:SCP:REP 2->185|1w1oA2|1.3e-23|30.6|183/206|d.145.1.1|1/1|FAD-binding domain| HM:SCP:REP 189->474|1e8gA1|7.8e-09|20.1|224/0|d.58.32.1|1/1|FAD-linked oxidases, C-terminal domain| OP:NHOMO 267 OP:NHOMOORG 149 OP:PATTERN -------------------------------------------------------------------- -----111222-2222222-21221222222111111121--------------------111--22---1---------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------- ------1--------4243111-4141--2212---122222211132333232123411-1------------------------------2--------------21-4121111---111111111151111111111111--111-1-1-1111123311131--2-3211----------632B3A4------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 469 STR:RPRED 96.7 SQ:SECSTR #####ccccccccEEETTccccHHHHHHHHHHHHcTTccccEEEEccccccccTTccTTcEEEEGGGGGccEEEcTTccEEEEETTccHHHHHHHHHTTTEEEccccccccccHHHHHTTccccTTHHHHccGGGcEEEEEEEETTccEEEEEccTccHHHHHHHTTcTTccEEEEEEEEEEEEcccEEEEEEEEEccHHHHHHHHHHHHccccccccEEEEEEEEGGGHHHHHHTTccccHHHHHHHHHHTccEEEEEEEEEEEcccTTHHHHHHHHHHHHHHTccccTTcEEEEEEHHHHHTHHHHHHHHHHHTTccccccHHHHHHHHHHHcTTEEEccEEEEEEGGGHHHHHHHcccccTTTccccccEEEEEEEGGGccTTcccccccccEEEHHHHHEEEEccccccTTccHHHHHHHHHHHHHHHHHTTcccEEcccccccHHHHHHHHcHHHHHHHHHHHcTTccc########### DISOP:02AL 484-486| PSIPRED cccccccccccccccccccEEccccHHHHHHHccHHHHcccEEEccccccccccccccccEEEEccccccEEEEEccccEEEEEccccHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHEEEEEEEEcccccEEEEcccccHHHHHHHHHccccccEEEEEEEEEEEEccccEEEEEEEcccHHHHHHHHHHHHHHcccccHHHHHHcHHHHEEcccEEEccccccccccccccccccccEEEEccccccccccccHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHHHccccccccEEEEEEEEHHHHHHHHHHHHHHHcccccEEccEEEcccccccccccccccccccccccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHccccccHHHHHHccHHHHHHHcccHHHHHHHHHcccccccHHHHHHHHccc //