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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55143.1
DDBJ      :             putative cobyric acid synthase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  212/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.23.16
:236 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   4->209 2abwB PDBj 1e-09 11.6 %
:RPS:SCOP  7->201 1gpwB  c.23.16.1 * 3e-10 13.2 %
:HMM:SCOP  5->221 1r9gA_ c.23.16.1 * 1.2e-21 26.8 %
:RPS:PFM   80->195 PF07685 * GATase_3 4e-09 38.2 %
:HMM:PFM   49->201 PF07685 * GATase_3 2e-32 33.3 147/158  
:BLT:SWISS 28->64 HSLU_THETN 2e-04 48.6 %
:BLT:SWISS 38->195 COBQ_OCHA4 1e-08 28.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55143.1 GT:GENE BAD55143.1 GT:PRODUCT putative cobyric acid synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(314572..315282) GB:FROM 314572 GB:TO 315282 GB:DIRECTION - GB:PRODUCT putative cobyric acid synthase GB:PROTEIN_ID BAD55143.1 LENGTH 236 SQ:AASEQ MGESTVRIGLVLPDVMGTYGDGGNALVLRQRLRMRGYDAEIVEINLTDPVPESLDIYTLGGAEDSAQRLATRHLCRYPGLQQAAAKGAPVLAICAAIQVLGNWYETSSGERVEGVGLIDVTTAPQDKRAIGEVVTAPTVPGLTEPLTGFENHRGGTTLGPDATGLARVTRGVGNGVGDGREGVVQGSVIGTYMHGPALARNPELADLLLCRALGVDSLPPLDLPEVTQLRRERLRA GT:EXON 1|1-236:0| BL:SWS:NREP 2 BL:SWS:REP 28->64|HSLU_THETN|2e-04|48.6|37/461| BL:SWS:REP 38->195|COBQ_OCHA4|1e-08|28.0|150/483| TM:NTM 1 TM:REGION 83->105| SEG 167->184|rvtrgvgngvgdgregvv| RP:PDB:NREP 1 RP:PDB:REP 4->209|2abwB|1e-09|11.6|198/226| RP:PFM:NREP 1 RP:PFM:REP 80->195|PF07685|4e-09|38.2|110/151|GATase_3| HM:PFM:NREP 1 HM:PFM:REP 49->201|PF07685|2e-32|33.3|147/158|GATase_3| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF07685|IPR011698| GO:PFM GO:0009236|"GO:cobalamin biosynthetic process"|PF07685|IPR011698| RP:SCP:NREP 1 RP:SCP:REP 7->201|1gpwB|3e-10|13.2|182/200|c.23.16.1| HM:SCP:REP 5->221|1r9gA_|1.2e-21|26.8|194/196|c.23.16.1|1/1|Class I glutamine amidotransferase-like| OP:NHOMO 215 OP:NHOMOORG 215 OP:PATTERN --------------------------------11---------------------------------- ---1111111111111111-111111111111111111111111------111111----11-11-111111111111--1-1-----------------------------------------------------11111---11-11-111----------11--111------------------11-1-----------------------------------------1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--1111111111111-111111-111-1--11111111--111111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 210 STR:RPRED 89.0 SQ:SECSTR ###ccEEEEEEETcTTcccHHcEcHHHHHHHHTTccTTEEEEEEccHHHHHTccEEEEccccHHHHHHHTcHHHHHHHHHHHHHTccccEEEETHHHHHHEEEEEccccccTTGGcccccEEEEEEcccccTTTcEEEETTccTTcEEEEEcccEEEEEccTTcEEEEEEEETTTEEEEEEEEEETTEEEEccccTTcccccHHHHHHHHHHH####################### PSIPRED cccccEEEEEEEcHHHccccccHHHHHHHHHHHHccccEEEEEEcccccccccccEEEcccccHHHHHHHHHHccccHHHHHHHHccccEEEEEcHHHHHHHHEEcccccEEccccEEccEEEEEccEEEEEEEEEEcccccccEEEEEEEccEEEEEcccccEEEEEEEccccccccccccEEEccEEEEEcHHHcccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcc //