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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55152.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  61/915 : Eukaryota  19/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:571 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   404->537 1dwqA PDBj 5e-05 13.1 %
:RPS:SCOP  418->535 1iunA  c.69.1.10 * 4e-07 17.9 %
:HMM:SCOP  105->537 1mtzA_ c.69.1.7 * 2.9e-21 26.6 %
:RPS:PFM   473->562 PF08386 * Abhydrolase_4 1e-05 40.2 %
:HMM:PFM   460->562 PF08386 * Abhydrolase_4 1.7e-26 38.4 99/103  
:HMM:PFM   138->159 PF12146 * Hydrolase_4 0.00064 31.8 22/79  
:BLT:SWISS 58->260,473->562 Y2248_MYCBO 1e-21 33.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55152.1 GT:GENE BAD55152.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 325852..327567 GB:FROM 325852 GB:TO 327567 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD55152.1 LENGTH 571 SQ:AASEQ MTTGPGVAAQDVHVGRWRIALVVVAMLPLAAGCAGAVQQQTALGQLAAQADAAATPRLDWTDCAEQQLAGYECAAARVPLDYARPDGETIELALVRQRAGDPQRRLGTLFAAAGGPGNSGLDWARGGPMFPGEISRRFDVVTFDQRGVGASAPVRCFADAAEQERFWSTMVLPPADAEQQLAAERAARAYAEGCARHSGALLPHLTTVDAARDLDLLRRAVGEDRLTFTGGSYATYLGQVYGALFGERVRALHLTSVIDPAVYGGDTRAEIAGTAAGTAEVFEEFLRLCAQGGRPECAFAEGGERSELVGESGPGAAEKAGSSGTERPSVTLTTAAGPAEADVERLRARDAALLERLRTGPITVGTGEQAVRVGYAEVVQAHALLLYDPRQGWPALAGLLAELDRGPHGDPAPVRQALAGGATPLDFLDSFTAITCADATLPRDPARWPALAQETPAATPDFDDFWLYMRQPCAAWPTPEQDARHVAGPWTLISDKPALLVNNRYDPATPLEFARRAQQELVNARLVVVEGGYGHEPGGECVRSLRERYLIDLQLPAPGATCTADRAPFAS GT:EXON 1|1-571:0| BL:SWS:NREP 1 BL:SWS:REP 58->260,473->562|Y2248_MYCBO|1e-21|33.0|285/520| TM:NTM 1 TM:REGION 18->40| SEG 20->31|alvvvamlplaa| SEG 34->55|agavqqqtalgqlaaqadaaat| SEG 175->196|adaeqqlaaeraarayaegcar| SEG 209->220|daardldllrra| SEG 269->280|aeiagtaagtae| SEG 339->358|aeadverlrardaallerlr| RP:PDB:NREP 1 RP:PDB:REP 404->537|1dwqA|5e-05|13.1|130/261| RP:PFM:NREP 1 RP:PFM:REP 473->562|PF08386|1e-05|40.2|87/102|Abhydrolase_4| HM:PFM:NREP 2 HM:PFM:REP 460->562|PF08386|1.7e-26|38.4|99/103|Abhydrolase_4| HM:PFM:REP 138->159|PF12146|0.00064|31.8|22/79|Hydrolase_4| RP:SCP:NREP 1 RP:SCP:REP 418->535|1iunA|4e-07|17.9|117/272|c.69.1.10| HM:SCP:REP 105->537|1mtzA_|2.9e-21|26.6|241/290|c.69.1.7|1/1|alpha/beta-Hydrolases| OP:NHOMO 162 OP:NHOMOORG 80 OP:PATTERN -------------------------------------------------------------------- ----3---------21122-22222222222222223-231-11221111111111-111121181868B2----------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------1------------1------11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------- -----------------213---2-21-------------------1-1223-61---1------------------------------11--221------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 169 STR:RPRED 29.6 SQ:SECSTR ###############################################################################################################################################################################################################################################################################################################################################################################ccEEEEEETHHHHHHHHHHHHHHHHcGGGHHHHHHTcccccTTHHHHHHHHHccccTTcEEEEEEcTTccEEEEEEccHHHHHHTTcTTccHHHHHHHHHHcccccccHHHHHHcccccTTTGGHGGGccEEEEEcTTcccccHHHHHHHHHHccccEEEEcccc#cccH################################## DISOP:02AL 1-7, 570-571| PSIPRED cccccEEEEcccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccEEEEEEEEEEcccccccccEEEEEcccccccHHHHHHHccccHHHHHccccEEEEcccccccccccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHccccHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEEccccccccHHHHHHHHHHcccccEEEEEccEEcccccHHHHHHHHHHHcccEEcccccccccccccccc //