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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55154.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.14.1
:285 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   139->262 1a8aA PDBj 1e-04 21.1 %
:HMM:SCOP  19->158 1orqC_ f.14.1.1 * 2.8e-08 23.3 %
:HMM:PFM   47->70 PF09907 * DUF2136 5.9e-05 29.2 24/76  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55154.1 GT:GENE BAD55154.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 329383..330240 GB:FROM 329383 GB:TO 330240 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55154.1 LENGTH 285 SQ:AASEQ MVASTAGSDLEPAPESETYPRKPPALWTDFVMLALAVVSVALVVWISFFEVSGHTYRVVVTIDYAICAVFAAEFLWRWRRAGWPWTFPLVYWYEVLGMIPVTSPLFRGFRLLRIVVILVRLARVADRVFGDRVTAAVVNRFVRTIVEVIKRPMTIAVLDEVAHVLRTGHYTRNIAAALEENRAEMDEMILELIKKDPQAGKVRYIPFHDEIIRLIADTTFRIVFQVLADPRTDELVSDMIRENVEQIRGAVRDGVRVRPSAYGPTPHHETVRYHLDKRATAPDQP GT:EXON 1|1-285:0| TM:NTM 3 TM:REGION 28->50| TM:REGION 55->77| TM:REGION 108->130| SEG 31->44|vmlalavvsvalvv| SEG 110->125|rllrivvilvrlarva| RP:PDB:NREP 1 RP:PDB:REP 139->262|1a8aA|1e-04|21.1|123/318| HM:PFM:NREP 1 HM:PFM:REP 47->70|PF09907|5.9e-05|29.2|24/76|DUF2136| HM:SCP:REP 19->158|1orqC_|2.8e-08|23.3|129/223|f.14.1.1|1/1|Voltage-gated potassium channels| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1----------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 123 STR:RPRED 43.2 SQ:SECSTR ##########################################################################################################################################HHHHHHHHHHHHHHHcccHHHHHHHHcc#HHHHHHHHHHHTTcccccccccHHHHHHHHHHTTTcccccHHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcHHHHH####################### DISOP:02AL 1-17, 279-285| PSIPRED cccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccEEccccccccccHHHHHHHHHHcccccccc //