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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55160.1
DDBJ      :             putative aspartokinase
Swiss-Prot:             

Homologs  Archaea  60/68 : Bacteria  845/915 : Eukaryota  54/199 : Viruses  0/175   --->[See Alignment]
b.1.15c.73.1d.58.18
:421 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   73->202 1ybdA PDBj 7e-04 29.6 %
:BLT:PDB   174->238 2v4yA PDBj 4e-06 45.0 %
:BLT:PDB   253->416 2dtjA PDBj 2e-56 64.6 %
:RPS:PDB   31->405 3c1mD PDBj 5e-59 28.1 %
:RPS:SCOP  4->241 2cdqA1  c.73.1.3 * 2e-55 30.1 %
:RPS:SCOP  261->398 1jv2A2  b.1.15.1 * 3e-24 12.9 %
:HMM:SCOP  3->246 2hmfA1 c.73.1.3 * 9.4e-73 44.0 %
:HMM:SCOP  250->329 2hmfA3 d.58.18.10 * 2.8e-18 41.3 %
:HMM:SCOP  331->421 2j0wA2 d.58.18.10 * 9.6e-25 44.0 %
:RPS:PFM   64->231 PF00696 * AA_kinase 3e-21 40.1 %
:HMM:PFM   3->231 PF00696 * AA_kinase 6.4e-54 38.2 212/243  
:HMM:PFM   267->322 PF01842 * ACT 2.5e-12 38.2 55/66  
:HMM:PFM   350->405 PF01842 * ACT 1.2e-11 37.5 56/66  
:BLT:SWISS 1->421 AK_MYCSM 0.0 85.3 %
:PROS 5->13|PS00324|ASPARTOKINASE
:REPEAT 2|255->334|335->408
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55160.1 GT:GENE BAD55160.1 GT:PRODUCT putative aspartokinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 334035..335300 GB:FROM 334035 GB:TO 335300 GB:DIRECTION + GB:PRODUCT putative aspartokinase GB:PROTEIN_ID BAD55160.1 LENGTH 421 SQ:AASEQ MALVVQKYGGSSVASAERIRRVAERIVETKKQGHDVVVVCSAMGDTTDELLDLAEQVAPAPPAREMDMLLTAGERISNALVAMAIHSLGAQARSFTGSQAGVITTGAHGNAKIIDVTPSRLREALDEGTIVLVAGFQGVSQDSKDVTTLGRGGSDTTAVALAAALEADVCEIYTDVDGVFTADPRIVSDAQRLEQVSYEEMLEMAACGSKVLMLRCVEYARRYNVPVHVRSSYTDKPGTYVYGSMEDIPLEKAILTGVAHDRSEAKVTVVGLPDEPGYAAKVFRAVADAEINIDMVLQNISKVETGKTDITFTLPKTEGARAVEMLTKRQGEIGFSQVLYDDHIGKVSLVGAGMKSHPGVTATFCEALADAGINIDLISTSEIRISVLVKDTELDDAVQVLHRAFDLGGDEVAVVHAGTGR GT:EXON 1|1-421:0| BL:SWS:NREP 1 BL:SWS:REP 1->421|AK_MYCSM|0.0|85.3|421/421| PROS 5->13|PS00324|ASPARTOKINASE|PDOC00289| NREPEAT 1 REPEAT 2|255->334|335->408| SEG 11->28|ssvasaerirrvaerive| SEG 155->171|dttavalaaaleadvce| BL:PDB:NREP 3 BL:PDB:REP 73->202|1ybdA|7e-04|29.6|108/225| BL:PDB:REP 174->238|2v4yA|4e-06|45.0|60/237| BL:PDB:REP 253->416|2dtjA|2e-56|64.6|164/164| RP:PDB:NREP 1 RP:PDB:REP 31->405|3c1mD|5e-59|28.1|367/466| RP:PFM:NREP 1 RP:PFM:REP 64->231|PF00696|3e-21|40.1|162/244|AA_kinase| HM:PFM:NREP 3 HM:PFM:REP 3->231|PF00696|6.4e-54|38.2|212/243|AA_kinase| HM:PFM:REP 267->322|PF01842|2.5e-12|38.2|55/66|ACT| HM:PFM:REP 350->405|PF01842|1.2e-11|37.5|56/66|ACT| GO:PFM:NREP 1 GO:PFM GO:0008652|"GO:cellular amino acid biosynthetic process"|PF00696|IPR001048| RP:SCP:NREP 2 RP:SCP:REP 4->241|2cdqA1|2e-55|30.1|236/304|c.73.1.3| RP:SCP:REP 261->398|1jv2A2|3e-24|12.9|132/139|b.1.15.1| HM:SCP:REP 3->246|2hmfA1|9.4e-73|44.0|243/0|c.73.1.3|1/1|Carbamate kinase-like| HM:SCP:REP 250->329|2hmfA3|2.8e-18|41.3|75/0|d.58.18.10|1/2|ACT-like| HM:SCP:REP 331->421|2j0wA2|9.6e-25|44.0|91/0|d.58.18.10|2/2|ACT-like| OP:NHOMO 1403 OP:NHOMOORG 959 OP:PATTERN 11-1--1111111111-111111111111111111111111111111111111212211-21--2-11 1221211111111111111-111111111111111111111221111111111111111111111111121222222211112111112222131111112313322242111111111111111222222222221112211111111-111111111111111111111111111111111111111112232222222222222222333332223222211333333322222222222222222222212-1121111-221122-11111111111111111111111111111-------------111111111123122333333323222222111221-121121112221212211121-2211111111111111111111111111111111111-111111111111111111111111111131111111111111111111111111111-11111--1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112121-111111111111121111111114311111111111111111111111111111333211212323333323233333322322-11111111-11122222222222222222-2222222222222222222323222222222222222222222222222222-2222222222221113111111111111112-22121111-1112111111111111111111111111111113--1-211-123333333333344222222222222221111111111----------1-------------------------2112222222111 ------1-----1111--------------------1----------11-1-1--1------1---11-----1-----------1-1------121111-1-224-23-----------------------------------------------------------------12222M2221255841622242122 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 417 STR:RPRED 99.0 SQ:SECSTR cccEEEEEcTTTTccHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTccHHHHHHHHHTcccHHHHHHHHTHHHHHHHHHHHHHHHHTTccEEEEcTTTTTEEEcccTTcccEEEcHHHHHHHHHHTTcEEEEEccEEEETTcccEEEccTTTHHHHHHHHHHHHTccEEEEEEcccccccccTTTcTTcccccEEEHHHHHHHHHTTcTTccGGGHHHHHHHTccEEEEETTcTTcccEEEEcccccccccccccEEEEEccEEEEEEEEcccHHHHHHHHHHHHHHTTccEEEEEcccTccEEETccEEEEEEGGGHHHHHHHHHcTTccccEEEEEEEccEEEEEEEcTTTTTcTTHHHHHHHHHHHTTccccEEEccccEEEEEEEGGGHHHHHHHHHHHHHccccccccccc#### PSIPRED ccEEEEEEcccEEccHHHHHHHHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHHHEEEEEcccccccEEEcccHHHHHHHHHcccEEEEcccccccccccEEEEEcccccHHHHHHHHHHHcccEEEEEcccccccccccccccccEEcccccHHHHHHHHHcccccccHHHHHHHHHcccEEEEEEccccccccEEEcccccccccccccEEEEEEccEEEEEEEcccccccHHHHHHHHHHHccccEEEEEccccccccccEEEEEEEEHHHHHHHHHHHHHHHHcccccEEEEEccEEEEEEEcccccccccHHHHHHHHHHHcccEEEEEEccccEEEEEEcHHHHHHHHHHHHHHHcccccEEEEEEEcccc //