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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55164.1
DDBJ      :             putative branched-chain amino acid aminotransferase
Swiss-Prot:             

Homologs  Archaea  37/68 : Bacteria  685/915 : Eukaryota  35/199 : Viruses  0/175   --->[See Alignment]
e.17.1
:304 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->304 1i1kA PDBj 1e-36 33.0 %
:RPS:PDB   8->304 2ej0D PDBj 2e-64 31.2 %
:RPS:SCOP  8->304 1a3gA  e.17.1.1 * 7e-64 32.3 %
:HMM:SCOP  6->292 1daaA_ e.17.1.1 * 3.6e-71 35.4 %
:RPS:PFM   51->271 PF01063 * Aminotran_4 2e-31 38.7 %
:HMM:PFM   51->286 PF01063 * Aminotran_4 3.3e-42 30.5 223/232  
:BLT:SWISS 6->303 ILVE_SYNY3 1e-42 33.7 %
:PROS 192->221|PS00770|AA_TRANSFER_CLASS_4

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55164.1 GT:GENE BAD55164.1 GT:PRODUCT putative branched-chain amino acid aminotransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 337038..337952 GB:FROM 337038 GB:TO 337952 GB:DIRECTION + GB:PRODUCT putative branched-chain amino acid aminotransferase GB:PROTEIN_ID BAD55164.1 LENGTH 304 SQ:AASEQ MANPHPQVFFGDRLVAAQDAQVGVASAAVLYGLSVYTVFPVHVDGARRTAFRLDDHFRRLEESCKIIGIDRFAHEWDFSRFTAAVRALIAANAPREDVFVRATVHVVESIPGTRVRGCEIRMSMFVYDAVPIVPQDGMRLKSSPWRRIPDNAIPSRAKVNGAYVNSVLAKQDAIDSGYDDCIFLDGNGHVCELSAANIFLVRGGTLITPDVSCDILDGINRRTILTLAAEDGIPVQERTVDLTELYIADEVFVTGTSAGAAPVLEVDGRVVADGAPGPVSQALRKRHAAALRTDEVHGWVTELD GT:EXON 1|1-304:0| BL:SWS:NREP 1 BL:SWS:REP 6->303|ILVE_SYNY3|1e-42|33.7|291/305| PROS 192->221|PS00770|AA_TRANSFER_CLASS_4|PDOC00618| BL:PDB:NREP 1 BL:PDB:REP 8->304|1i1kA|1e-36|33.0|291/298| RP:PDB:NREP 1 RP:PDB:REP 8->304|2ej0D|2e-64|31.2|292/301| RP:PFM:NREP 1 RP:PFM:REP 51->271|PF01063|2e-31|38.7|212/220|Aminotran_4| HM:PFM:NREP 1 HM:PFM:REP 51->286|PF01063|3.3e-42|30.5|223/232|Aminotran_4| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF01063|IPR001544| GO:PFM GO:0008152|"GO:metabolic process"|PF01063|IPR001544| RP:SCP:NREP 1 RP:SCP:REP 8->304|1a3gA|7e-64|32.3|288/295|e.17.1.1| HM:SCP:REP 6->292|1daaA_|3.6e-71|35.4|277/277|e.17.1.1|1/1|D-aminoacid aminotransferase-like PLP-dependent enzymes| OP:NHOMO 1296 OP:NHOMOORG 757 OP:PATTERN ------------------111--1222223221111111111211111111111-----------122 1121211------111111-1111111111112111213212111211111111121111121121221-2-1111---11-21122211111111------2121-222---------------111121121112222211122311211111111111111122---1111111111111---1111-12455555555455555523443355533312111111113212222222222222222222-------2----------1---------------------------------------------------212-2-------1-2111131111-1-21--2233211111222112-112213223--1--224212213333222222222115-34434332353-5223333233331314345454554341111111121111125----------111111111111111----1212122444324424352222222133332332332221122122111122431221222211-------222233-13123111121121111111111332312-11222211111211111111111111111121121121------1111-1-2111-11---2322------11431111111111111-1111111111111111111111331321111111111111111111111112-11111111111111-111111121122211---------------11111111112222221111211-111--111-1111131112222222122211111111111111221-111111----------1-------------------------1211-11111111 ------1--------1----11-1111---------------------12234311--------------------------------------------1-------2----------------------------------------------------------------1--33-P1113-5455-92131---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 304 STR:RPRED 100.0 SQ:SECSTR EEEEccEEEETTEEEcGGGccccTTcHHHHHccEEEccEEEEEETTEEEEEcHHHHHHHHHHHHHHTTcccccccccHHHHHHHHHHHHHHTTccccEEEEEEEEccccccccccGGGccEEEEEEEEccccccTTcEEEEEcccccccTTTccTTcccGGGHHHHHHHHHHHHHTTccEEEEEcTTccEEEEcccEEEEEETTEEEEEccTTTccccHHHHHHHHHHHHTTcEEEEEcccHHHHHTccEEEEEETTTEEEEEEEETTEEcTTccccHHHHHHHHHHHHHHccGGGGGGEEEcc DISOP:02AL 1-2| PSIPRED ccccccEEEEccEEEcccccEEcHHHHHHHHccEEEEEEEEEEcccccEEEcHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccEEEEEEEEEccccccccccccccEEEEEEEEcccccccccEEEEEEEEEEcccccccccEEEEccHHHHHHHHHHHHHccccEEEEEcccccEEEEccEEEEEEEccEEEEEcccccccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHEEEEcccEEEEEEEEEccEEcccccccHHHHHHHHHHHHHHccccccccEEEcc //