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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55166.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  40/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:415 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   62->116 PF00324 * AA_permease 1e-08 45.5 %
:HMM:PFM   19->387 PF00324 * AA_permease 8.3e-38 26.0 369/479  
:BLT:SWISS 5->390 Y2022_MYCBO 5e-72 72.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55166.1 GT:GENE BAD55166.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(339382..340629) GB:FROM 339382 GB:TO 340629 GB:DIRECTION - GB:PRODUCT putative transporter GB:PROTEIN_ID BAD55166.1 LENGTH 415 SQ:AASEQ MTSADPGNALHRRLGLTDSVVIGLGSMVGAGIFAALAPAAAAAGSWLLLALGVAALLAYCNAMSSARLAARYPVSGGTYVYGRERLGPFWGYLAGWGFVVGKTASCAAMALTVGHYAWPEHARWVAVATVVAITAVNYTGVQKSALATRIIVGAVLTVLVVVVVVAFSGSHSAAAPMPGRIGPGDVLQAAGLLFFAFAGYARIATLGEEVREPHRTIPRAIRLALGLALAVYALVAVAALLTLGSQGLATAVDPLARVVAAAGAGWLTPLVRAGAVLAAAGSLLALILGVSRTTLAMARDGHLPSPLATVHPRFGVPHRAELAVGAVVAVVAATADLRSAIGFSSFTVLVYYLVANLSAGTLGAGEGRPARWIPVVGAAGCVIVGFALPIGSVLAGLAVLALGAGWYAVRSARLA GT:EXON 1|1-415:0| BL:SWS:NREP 1 BL:SWS:REP 5->390|Y2022_MYCBO|5e-72|72.5|382/440| TM:NTM 10 TM:REGION 16->38| TM:REGION 42->64| TM:REGION 122->144| TM:REGION 147->168| TM:REGION 182->204| TM:REGION 220->242| TM:REGION 262->284| TM:REGION 319->339| TM:REGION 341->362| TM:REGION 380->402| SEG 29->58|gagifaalapaaaaagswlllalgvaalla| SEG 125->136|vavatvvaitav| SEG 152->166|vgavltvlvvvvvva| SEG 189->199|aagllffafag| SEG 219->241|rairlalglalavyalvavaall| SEG 270->290|lvragavlaaagsllalilgv| SEG 323->333|avgavvavvaa| SEG 391->405|gsvlaglavlalgag| RP:PFM:NREP 1 RP:PFM:REP 62->116|PF00324|1e-08|45.5|55/429|AA_permease| HM:PFM:NREP 1 HM:PFM:REP 19->387|PF00324|8.3e-38|26.0|369/479|AA_permease| GO:PFM:NREP 3 GO:PFM GO:0006810|"GO:transport"|PF00324|IPR004841| GO:PFM GO:0016020|"GO:membrane"|PF00324|IPR004841| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00324|IPR004841| OP:NHOMO 41 OP:NHOMOORG 40 OP:PATTERN -------------------------------------------------------------------- --------------1--11-11---111111-11211111-1-1-1-1111-1-1-1---11--11111------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-14| PSIPRED cccccccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHcccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //