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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55169.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  55/68 : Bacteria  700/915 : Eukaryota  152/199 : Viruses  0/175   --->[See Alignment]
c.1.7
:291 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->282 1pyfA PDBj 9e-30 35.3 %
:RPS:PDB   15->291 3eauA PDBj 4e-58 25.6 %
:RPS:SCOP  17->288 1pyfA  c.1.7.1 * 2e-68 33.7 %
:HMM:SCOP  13->292 1pz1A_ c.1.7.1 * 1.8e-80 45.8 %
:RPS:PFM   27->290 PF00248 * Aldo_ket_red 3e-39 46.3 %
:HMM:PFM   26->289 PF00248 * Aldo_ket_red 2.4e-72 37.9 256/284  
:BLT:SWISS 1->286 YH5B_SCHPO 2e-90 55.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55169.1 GT:GENE BAD55169.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 341914..342789 GB:FROM 341914 GB:TO 342789 GB:DIRECTION + GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD55169.1 LENGTH 291 SQ:AASEQ MSTNVASRPADAAGTFRLGGDLPVNRLGYGAMQLTGPGVWGDPRDPEEAVRVLRRAVELGVNFIDTADSYGPFVSEQLIRTALHPYPDDLVIATKAGLTRSGPGDWRPVGRPEYLRQQAELSLRHLGVDRIDLYQLHRIDPQVPLADQLGELVALQQEGKIRHIGVSQVSVEQLQQAREIAEIVSVQNLYNLANRTDEAVLDYAERENIAFIPWFPIATGELARPGGPLDAIATRHGATPAQLALAWLLRRSPVMLPIPGTSSVAHVEENTAAAQITLSDSEFEELSAAAE GT:EXON 1|1-291:0| BL:SWS:NREP 1 BL:SWS:REP 1->286|YH5B_SCHPO|2e-90|55.3|284/306| BL:PDB:NREP 1 BL:PDB:REP 21->282|1pyfA|9e-30|35.3|258/309| RP:PDB:NREP 1 RP:PDB:REP 15->291|3eauA|4e-58|25.6|270/327| RP:PFM:NREP 1 RP:PFM:REP 27->290|PF00248|3e-39|46.3|255/281|Aldo_ket_red| HM:PFM:NREP 1 HM:PFM:REP 26->289|PF00248|2.4e-72|37.9|256/284|Aldo_ket_red| GO:PFM:NREP 2 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00248|IPR001395| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00248|IPR001395| RP:SCP:NREP 1 RP:SCP:REP 17->288|1pyfA|2e-68|33.7|270/311|c.1.7.1| HM:SCP:REP 13->292|1pz1A_|1.8e-80|45.8|277/0|c.1.7.1|1/1|NAD(P)-linked oxidoreductase| OP:NHOMO 4644 OP:NHOMOORG 907 OP:PATTERN 22212123666656632A44514-A33B3DB42-----1--1122--1-1334-11111126433-11 67F3S22445526138722-24223D222222386849A96F7NIHC45GF2EHJ449--9885I3KKLH64444454--125--11-6842-3-----116143K1634--------------11-1111--12212243111C-424611322-----1--121774F4------------86311531A3755555655455567543556855724636556777767N2444444344444445443534916712523AA558834727A243332211114322222222222111-111111111222111222322-24333333323231------5-31-313-2--1-2-341123142-13-49442-----B79B91-36644311111111117-78878D69AD1-NFFAHHGTOIDH9625232631344342222222279863124------------------------------3543526648CBCBCDA5454AADB555636FAI3534--4447352253377114212111-----------132121--2---13--1-4111125114886BK-21-1--------131-1--111--1112339434--7242222223132122112112----112------77592B88779899987-8788A868A889C878888DED771125476867669776778956654651-A87888778888----------222-34951-18-5-------1-2231224-11C277574878754575878111-11--111122222222222255878775553-----25221222111-1-----2----1-------------2------2252165665296 -----23-5311122A775ABFBFHKI3323237252424323323CA9IBFJFCCB3364521211222365182213246664454-LWI7CZC977A624B78--7EJ34213-----2-------------1-------------1-----2214-11-9612215621312364V2149EECHI4CG2596G93 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 291 STR:RPRED 100.0 SQ:SECSTR ccccTTcEcccTTcEEEcTTccEEEcEEEEcTTccccccccccccHHHHHHHHHHHHHTTccEEEEETTGGGGHHHHHHHHHHHHHTGGcEEEEEEccccccGGGcccGccHHHHHHHHHHHHHHHTcccEEEEEEccccTTccHHHHHHHHHHHHHTTcEEEEEEEcccHHHHHHHHHHHHccEEEEEccTTccHHHHHHHHHHHHccEEEEEcTTGGGGGGTTTTTHHHHHHHHTccHHHHHHHHHHccTTccEEEEccccHHHHHHHHGGGGGGccHHHHHHHHHHHc DISOP:02AL 1-13| PSIPRED ccccccccccccccEEEcccccEEccEEEEEEcccccccccccccHHHHHHHHHHHHHccccEEEEHHHccccccHHHHHHHHHHccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHccccEEEEEEEEcccccccHHHHHHHHHHHHHHccEEEEEEEcccHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHcccHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHcccccHHHHHHHHHHHc //