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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55174.1
DDBJ      :             putative DNA-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:309 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   32->90 2axuC PDBj 2e-07 10.5 %
:RPS:SCOP  32->90 1y7yA1  a.35.1.3 * 3e-06 16.9 %
:HMM:SCOP  27->93 2a6cA1 a.35.1.13 * 5.4e-06 22.4 %
:HMM:PFM   47->90 PF01381 * HTH_3 0.00056 29.5 44/55  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55174.1 GT:GENE BAD55174.1 GT:PRODUCT putative DNA-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 344246..345175 GB:FROM 344246 GB:TO 345175 GB:DIRECTION + GB:PRODUCT putative DNA-binding protein GB:PROTEIN_ID BAD55174.1 LENGTH 309 SQ:AASEQ MRDARLPSTVWTVYSDGGEGSGMASPTVAGWELSVRIRRQAADRAVTASQMARWLSVSPQYFSQIMQGKGTFTEEKLVLLLDRLEFEPDERDDLLALRGIAKMRNPYAEYSALYDDALLQLFGLEAGADAIRSFEIAVVPGLLQTEDYIRAIMRSTVADARPTEVEQRVRVRLRRQQFLTGPAGGRLRAIVGQSALMYEVGGPEVHGAQLRHLLELPGKLGEAVELRVVPFEAGGTLASLNSATFHLLDFASPRLPTVAWLETALTGRVEEDPREVERLQYIDEQLQRIALDPADSHALIQELASRYRT GT:EXON 1|1-309:0| SEG 164->177|eveqrvrvrlrrqq| RP:PDB:NREP 1 RP:PDB:REP 32->90|2axuC|2e-07|10.5|57/295| HM:PFM:NREP 1 HM:PFM:REP 47->90|PF01381|0.00056|29.5|44/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 32->90|1y7yA1|3e-06|16.9|59/69|a.35.1.3| HM:SCP:REP 27->93|2a6cA1|5.4e-06|22.4|67/0|a.35.1.13|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 123 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- ----4-------------------------------9----537----------------8B--E3HFC87---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 100 STR:RPRED 32.4 SQ:SECSTR ######################cccHHHHHHcHHHHHHHHHHHTTccHHHHHTHHTTcHHHHHHHTTTcccccHHHHHHHHHHHTccHHHHHHTccccHHHHHHHHHHHHccccHHHHHHHH########################################################################################################################################################################################### DISOP:02AL 1-6, 8-9, 307-309| PSIPRED cccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHccccHHHHHHHHHHHccEEEEEEEEEccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEccEEEEEcccHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccccccccEEEEEccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcc //