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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55187.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  144/915 : Eukaryota  126/199 : Viruses  0/175   --->[See Alignment]
d.157.1
:266 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   115->266 2zo4A PDBj 2e-10 35.7 %
:RPS:PDB   13->218 1dd6B PDBj 7e-12 11.5 %
:RPS:SCOP  33->266 1qh3A  d.157.1.2 * 5e-19 14.7 %
:HMM:SCOP  4->240 1k07A_ d.157.1.1 * 2.9e-41 32.6 %
:HMM:PFM   34->185 PF00753 * Lactamase_B 1.3e-20 24.7 150/194  
:HMM:PFM   169->233 PF10824 * DUF2580 0.0002 20.3 64/100  
:BLT:SWISS 14->266 LACB2_DROME 5e-21 30.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55187.1 GT:GENE BAD55187.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 355749..356549 GB:FROM 355749 GB:TO 356549 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD55187.1 LENGTH 266 SQ:AASEQ MRAMTLTHPAYGRVRQVTPTAAVLLADNPGQMTLDGTNTWLLRAPGATEYVVVDPGPKDKKHTEAILAATDGRIALTLITHHHHDHTGGIDRLVKLTGAPVTAADPGYLHGWDTPLADDAVLEAAGLRIRTLATPGHTSDSVSFVLDDAVITGDTILGSGTTVLESRSGALADYLDSLDRLLAEGSGKALLPAHGPDHADLAPVAQYYVKHRHERLDQVRAALRELGADAGAMAVVRKVYADVDKRLWPAARSSVQAQLDYLRSRG GT:EXON 1|1-266:0| BL:SWS:NREP 1 BL:SWS:REP 14->266|LACB2_DROME|5e-21|30.9|246/292| SEG 79->91|ithhhhdhtggid| BL:PDB:NREP 1 BL:PDB:REP 115->266|2zo4A|2e-10|35.7|140/301| RP:PDB:NREP 1 RP:PDB:REP 13->218|1dd6B|7e-12|11.5|200/217| HM:PFM:NREP 2 HM:PFM:REP 34->185|PF00753|1.3e-20|24.7|150/194|Lactamase_B| HM:PFM:REP 169->233|PF10824|0.0002|20.3|64/100|DUF2580| RP:SCP:NREP 1 RP:SCP:REP 33->266|1qh3A|5e-19|14.7|231/260|d.157.1.2| HM:SCP:REP 4->240|1k07A_|2.9e-41|32.6|224/262|d.157.1.1|1/1|Metallo-hydrolase/oxidoreductase| OP:NHOMO 310 OP:NHOMOORG 272 OP:PATTERN ------------------------1--1---------------------------------------- ---1111111111111111-1111111111111111122211111-11----11111---111-1111111---------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----1111111111111111111-1111-11111111111-11111111111111111-11----111--------111-----------------------------------1111------------------------------1111-------111111111-----------------------------------------------1--11---------------------------------1---------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------ ----11--1----1111112341121211222223211111111-1-1221111111121111---------------------------111111111----1----3-11111-11-1-111111-1141-1-11--111111111-11--1-21111-112-111112-2-2---15111--111-211--1-112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 266 STR:RPRED 100.0 SQ:SECSTR cccEEEcTTccEEEEEEETEEEEEEEEEETTTEEEEEEEEEEEETTEEEEEEEcccccHHHHHHHHHHHHTTEEEEEEcccccHHHHTTHHHHHHTTccEEEEHHHHHHHHHcEEEcccEEEEETTTEEEEcccccccTTccEEEETTEEEEETTccTTcccccTccTccTTTHHHHHHHHHHHTTccEEEEcccccccTHHHHHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHTTcEEEEcHHHHHHHHHHTTccTTccccHHTT DISOP:02AL 1-4| PSIPRED ccccccccccccccEEEcccEEEEEEccccccEEccEEEEEEEEccccEEEEEEcccccHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHccccEEEccHHHcccccEEEccccEEEEccEEEEEEEEcccccccEEEEEccEEEEEEEEEcccccccccccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcc //