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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55192.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  306/915 : Eukaryota  61/199 : Viruses  0/175   --->[See Alignment]
d.113.1
:239 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   73->172 1nqzA PDBj 7e-09 40.2 %
:RPS:PDB   73->179 2b0vA PDBj 4e-12 14.4 %
:RPS:SCOP  45->200 1nqyA  d.113.1.1 * 1e-19 36.0 %
:HMM:SCOP  29->212 1nqzA_ d.113.1.1 * 2.1e-26 26.9 %
:RPS:PFM   73->174 PF00293 * NUDIX 1e-05 35.6 %
:HMM:PFM   68->179 PF00293 * NUDIX 6e-20 30.6 108/135  
:BLT:SWISS 73->144 NUDL_ERWCT 1e-14 54.9 %
:PROS 74->94|PS01293|NUDIX_COA
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55192.1 GT:GENE BAD55192.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 359450..360169 GB:FROM 359450 GB:TO 360169 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55192.1 LENGTH 239 SQ:AASEQ MTLEIPADTPAWLRRAVEPGALDPVDSLSKARAVRRLMTLTAEPRQAAVLVLFGGSPEPDPGAPGGLPADADVLLTQRAATMRQHRGQVAFPGGATDPGDRDPVDTALREATEETGLLRAGVQPVATLPKLFVPPSRFDVTPVVAYWREPSEVRVVDPAETERVVRVPMAELLDPANRFLVRSSFGYQSPAFQVDGMLVWGLTGGILAGLISGAGWEIEWDRTDVRDLEEALAAVGMSL GT:EXON 1|1-239:0| BL:SWS:NREP 1 BL:SWS:REP 73->144|NUDL_ERWCT|1e-14|54.9|71/192| PROS 74->94|PS01293|NUDIX_COA|PDOC00695| SEG 57->72|pepdpgapgglpadad| SEG 201->215|gltggilaglisgag| BL:PDB:NREP 1 BL:PDB:REP 73->172|1nqzA|7e-09|40.2|92/171| RP:PDB:NREP 1 RP:PDB:REP 73->179|2b0vA|4e-12|14.4|104/146| RP:PFM:NREP 1 RP:PFM:REP 73->174|PF00293|1e-05|35.6|101/132|NUDIX| HM:PFM:NREP 1 HM:PFM:REP 68->179|PF00293|6e-20|30.6|108/135|NUDIX| GO:PFM:NREP 1 GO:PFM GO:0016787|"GO:hydrolase activity"|PF00293|IPR000086| RP:SCP:NREP 1 RP:SCP:REP 45->200|1nqyA|1e-19|36.0|136/170|d.113.1.1| HM:SCP:REP 29->212|1nqzA_|2.1e-26|26.9|182/187|d.113.1.1|1/1|Nudix| OP:NHOMO 404 OP:NHOMOORG 375 OP:PATTERN ------------------------111-111-----------------------------------11 ----111111111111111-11111111111-1111111111111111----111111--11111121111-----------1----------------1-1111--11---------------------------11111---1--------------------------------------111------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------1111------111111111111---1--1--1--11-11-1-11--111-111111111--1-1-1-11111-------------111--------------------------------111-1111-1111111111111-11111111111111-111111-11111-11111-----1----------111--1------------1-1-11---11-11------------------------------1111-1111-111111111111-1111-11----11--------1111-1---------------------------------11--11-111111111111111---------111111111111---1----------1111---------------1111111111111111-11-1111-1111----------111-1111111111--11111111------1-------------------------------------------------------- ------1--------------------------------1----------------------------------------------11-121-11--------11--1--221232-1-------1-1-241-2-21---21224-11-----12-1-2111--21-111-1111----1---1--115-22--1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 125 STR:RPRED 52.3 SQ:SECSTR ########################################################################EEEEEEccTccccccEEEccEEEccTTcccHHHHHHHHHHHHHcEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEcTTccccTTEEEEEEEEHHHHHHTGGccHHHHccEETTcccccHHH########################################## DISOP:02AL 1-3| PSIPRED cccccccccHHHHHHHcccHHHccccHHHHHHcccccccccccccccEEEEEEEcccccccEEEEEEccccEEEEEEccccccccccEEEccccccccccccHHHHHHHHHHHHHcccHHHEEEEEEEccccccccccEEEEEEEEEccccccccccHHHHHHHHHccHHHHcccccEEEEEccccEEEEEEEEccEEEEEHHHHHHHHHHHHcccccccccccccccHHHHHHHcccc //