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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55194.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  295/915 : Eukaryota  141/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:310 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->142 2e3jA PDBj 2e-26 45.2 %
:RPS:PDB   20->310 3e3aB PDBj 2e-31 24.0 %
:RPS:SCOP  18->310 1a7uA  c.69.1.12 * 1e-32 28.4 %
:HMM:SCOP  16->310 1qo7A_ c.69.1.11 * 9.4e-63 33.9 %
:RPS:PFM   70->155 PF00561 * Abhydrolase_1 7e-10 44.2 %
:HMM:PFM   70->305 PF00561 * Abhydrolase_1 2.1e-22 22.9 218/231  
:HMM:PFM   28->89 PF12146 * Hydrolase_4 1.4e-09 34.4 61/79  
:BLT:SWISS 22->309 YFHM_BACSU 6e-34 35.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55194.1 GT:GENE BAD55194.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(361363..362295) GB:FROM 361363 GB:TO 362295 GB:DIRECTION - GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD55194.1 LENGTH 310 SQ:AASEQ MSPTPPDPSTVRYDGPWTHRDVHANGIRFHVVEAAPERTDAPLVVLLHGFADFWWSWRHQLTGLADLGYRAVAVDLRGYGDSDKPPRGYDGWTLAGDVAGLIRALGHTEAVLVGHAEGGLVCWATAVLHPRLVRAIALVSSPHPAALKAAVLTDARQRRAWLPAFLRCQLPRLPEHRLTTADGFEVERMLRRRVGAQWAGTSEFVDTARRMRTAIRIPGAAHCALEYQRWAFRSQWRPDGRRFMATMRDPIDIPVLSLRGEHDNYLLRPTFHRGHRWAPHRRLVTVPEAGHFAHQENPDVVTTELAKFLA GT:EXON 1|1-310:0| BL:SWS:NREP 1 BL:SWS:REP 22->309|YFHM_BACSU|6e-34|35.2|270/286| BL:PDB:NREP 1 BL:PDB:REP 19->142|2e3jA|2e-26|45.2|124/346| RP:PDB:NREP 1 RP:PDB:REP 20->310|3e3aB|2e-31|24.0|263/275| RP:PFM:NREP 1 RP:PFM:REP 70->155|PF00561|7e-10|44.2|86/211|Abhydrolase_1| HM:PFM:NREP 2 HM:PFM:REP 70->305|PF00561|2.1e-22|22.9|218/231|Abhydrolase_1| HM:PFM:REP 28->89|PF12146|1.4e-09|34.4|61/79|Hydrolase_4| RP:SCP:NREP 1 RP:SCP:REP 18->310|1a7uA|1e-32|28.4|271/277|c.69.1.12| HM:SCP:REP 16->310|1qo7A_|9.4e-63|33.9|292/0|c.69.1.11|1/1|alpha/beta-Hydrolases| OP:NHOMO 1232 OP:NHOMOORG 443 OP:PATTERN ------------------------1--21-1-------------1-1-------------------1- -21-711111111156533-331198555556933319B9244841--221-4-2212--331-854B952------------------------------1-113--1----------------22---1-1---54444---4232342244233------2-215452--1---------111-------1-----2------11-2-1112-----1--11------14--------------------------------------------------------------------------------------------113222111112---11----111--1--1---1---------1----2-15114-----6-B56---31454------------32533429-34-33311221323111-2231-2212111--------2-1-1-2-------------------------------2152------4666653222133633333235664126-25411211131214-11------------------14-2-------------322-113--2-2253-1-----------------------------------1-1------1---------------1-1--------1---------------------------------------------1-------------1-----------------------------------412----------------11111---1-3-33332343322231111------------------------32-----111------1-----11-----------------------------------------------1- --------------13442-122524322-1--22-111111111121162254223--121-----1----------------1----4244131--1--22111-22175342433433333444336K3-348132243342-31213215422336431231--359321713114-1-4458AF4A81-54752 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 310 STR:RPRED 100.0 SQ:SECSTR cGccccGGGTccEccccccccTTccccEEEEEEEccEEcccEEEEEEccTTccGGGGTTHHHHHHHTTEEEEEEccTTcGGGTTccGcccHHHHHHHHHHHHHHTTcccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEcccccccHHHHHHHHHHHHHHHTTcHHHHcccHHHHHHHHHHHHccHHHHTcHHHHHHHHcTTTTTTTHHHHHccccccHHHHHHTTcccccccHHHGGGGGGHHHTTGGcccccEEEEEETTcccccHHHHHHHHHHcTTEEEEEETTccTTHHHHcHHHHHHHHHHHHH DISOP:02AL 1-8| PSIPRED ccccccccccccccccccEEEEEEccEEEEEEEcccccccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHHHHHHcEEEEEEcccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHcccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccEEEEEccccccccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHc //