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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55196.1
DDBJ      :             putative sodium/proton antiporter
Swiss-Prot:NHAA_NOCFA   RecName: Full=Na(+)/H(+) antiporter nhaA;AltName: Full=Sodium/proton antiporter nhaA;

Homologs  Archaea  0/68 : Bacteria  356/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
:416 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   36->370 1zcdA PDBj 1e-47 48.3 %
:RPS:PFM   9->370 PF06965 * Na_H_antiport_1 3e-61 41.0 %
:HMM:PFM   10->383 PF06965 * Na_H_antiport_1 1.7e-121 46.6 373/378  
:BLT:SWISS 1->416 NHAA_NOCFA 0.0 100.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55196.1 GT:GENE BAD55196.1 GT:PRODUCT putative sodium/proton antiporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(362840..364090) GB:FROM 362840 GB:TO 364090 GB:DIRECTION - GB:PRODUCT putative sodium/proton antiporter GB:PROTEIN_ID BAD55196.1 LENGTH 416 SQ:AASEQ MITRVRSELTRYLRTETVGGAILLVAAAIALLWVNSPWGDSYLRMTETVLAIEPLHLELTLADWTKDGLLAVFFFVAGLELKRELVVGELADPKRAALPIIAAVGGVVTPALIAAVIGHGAPGMDKGWAIPVATDIAFALGVLALTGSRIPATARVFLLSLAVVDDLLAIILIAVLFTVGVSLLWLLAAAACMAGWWLAQRRRLRTPLVYVPLALVTWYALHEAGVHPTLAGVALGLLTRVRPDPDEEWAPAARLEHLIQPVSAGICVPLFALFAAGVPLNATVFGELFTDRLALAVMLGLLLGKTIGIFGISWVAIRFGLATRPSGLGYRDMFALSVLGAIGFTVSLLVAELALPDGDTVELAKAAVLITSLAASLAGSALLLRRGRVHQARQDALELQPDEGDASDPSEGGSLR GT:EXON 1|1-416:0| SW:ID NHAA_NOCFA SW:DE RecName: Full=Na(+)/H(+) antiporter nhaA;AltName: Full=Sodium/proton antiporter nhaA; SW:GN Name=nhaA; OrderedLocusNames=NFA_3540; SW:KW Antiport; Cell membrane; Complete proteome; Ion transport; Membrane;Sodium; Sodium transport; Transmembrane; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->416|NHAA_NOCFA|0.0|100.0|416/416| GO:SWS:NREP 7 GO:SWS GO:0015297|"GO:antiporter activity"|Antiport| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0006811|"GO:ion transport"|Ion transport| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0006814|"GO:sodium ion transport"|Sodium transport| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| TM:NTM 11 TM:REGION 13->34| TM:REGION 60->81| TM:REGION 96->118| TM:REGION 125->147| TM:REGION 151->173| TM:REGION 177->199| TM:REGION 205->227| TM:REGION 262->284| TM:REGION 296->318| TM:REGION 331->353| TM:REGION 363->384| SEG 18->32|vggaillvaaaiall| SEG 158->176|llslavvddllaiiliavl| SEG 183->199|llwllaaaacmagwwla| SEG 293->304|lalavmlglllg| SEG 372->388|slaaslagsalllrrgr| BL:PDB:NREP 1 BL:PDB:REP 36->370|1zcdA|1e-47|48.3|331/376| RP:PFM:NREP 1 RP:PFM:REP 9->370|PF06965|3e-61|41.0|361/378|Na_H_antiport_1| HM:PFM:NREP 1 HM:PFM:REP 10->383|PF06965|1.7e-121|46.6|373/378|Na_H_antiport_1| GO:PFM:NREP 3 GO:PFM GO:0006814|"GO:sodium ion transport"|PF06965|IPR004670| GO:PFM GO:0006885|"GO:regulation of pH"|PF06965|IPR004670| GO:PFM GO:0016021|"GO:integral to membrane"|PF06965|IPR004670| OP:NHOMO 441 OP:NHOMOORG 365 OP:PATTERN -------------------------------------------------------------------- -1--1---------1------2---1------22221123-31222---21-1113-1113321112141111111111-21------1111-111---1-2111211-1---------------1--------11-----------------------------------------------12----------------------------------------------------------------------------------------------------------------------------------------------2------------11------------1------------------1-1111211111-----11-------1111111112-21113112-1-1----1---2--11---1----------11111111411211-1--------------1---11---------122111111-1--------------1-----------1-----------1--1--11---1------------1--1-1--1--1-11--1---12---2--11-22-12112222222212111111111-11111111-3--2-2111112111111111111---1----------11111111111111111-11111111111111111112111111111111111111111111111111111111111111111--1------11-1-----111111111111111-------1112-----1111-2121-222211111111-11111111111121----------------2-11----------------------------------------------------- ---------------------------------------1--------------------------------------------------------------------2------------------------------------------------------1--------------23111---------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 331 STR:RPRED 79.6 SQ:SECSTR ###################################HHHHHHHTT#cEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcTTTccTTTcHHHHHHHHHHTTTTHHHHGGGccccTTHHHHTcccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHTTcccTHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHccccGGGcc##cHHHHHHHHHHHHHHHTHHHHHHHHHcccccccccccTH#HHHccTTTTHHHHHTTGGGcTTHHHHTcccTTTcccccccGGGGTTHHHHTTccHHHHHHHHHHHccccccHHHHHHHHHH############################################## DISOP:02AL 1-2, 244-250, 388-416| PSIPRED cccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccccccccccccccccccccc //