[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55198.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  36/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.265.1
:248 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   116->233 3dd9D PDBj 1e-10 9.2 %
:HMM:SCOP  131->244 2g03A1 a.265.1.1 * 7.1e-06 24.0 %
:HMM:PFM   131->179 PF02661 * Fic 0.00019 28.6 49/96  
:HMM:PFM   16->61 PF06635 * NolV 0.00031 31.1 45/207  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55198.1 GT:GENE BAD55198.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 366345..367091 GB:FROM 366345 GB:TO 367091 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55198.1 LENGTH 248 SQ:AASEQ MSDPLQPLVDLPGVRDAADRARDALAAVHRHRANLRGWPTTAAEAAVRAARSSAAIEGGSTEIPADGRVADPILAGSLRVGQALDGDALRNLTAVWQRAPLQALARLHLLAAADLVEDEQSLGRPRTDPGVAQRLDLLVQTLQATHAPAPVIAAVVHGELLALRPFGSGDGIVARAASRLVTVASGLDPHSLGVPEVFWLRRRQAYLDAAAAFATGDPSGVGGWVILCCGALEDGAREATSIADAAAS GT:EXON 1|1-248:0| SEG 14->33|vrdaadrardalaavhrhra| SEG 42->55|aaeaavraarssaa| SEG 99->115|aplqalarlhllaaadl| SEG 144->157|athapapviaavvh| RP:PDB:NREP 1 RP:PDB:REP 116->233|3dd9D|1e-10|9.2|109/119| HM:PFM:NREP 2 HM:PFM:REP 131->179|PF02661|0.00019|28.6|49/96|Fic| HM:PFM:REP 16->61|PF06635|0.00031|31.1|45/207|NolV| HM:SCP:REP 131->244|2g03A1|7.1e-06|24.0|100/0|a.265.1.1|1/1|Fic-like| OP:NHOMO 36 OP:NHOMOORG 36 OP:PATTERN -------------------------------------------------------------------- -----------1-111111-11111-11111111111111-1------------------11--1111111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 129 STR:RPRED 52.0 SQ:SECSTR ###################################################################################################################HHHHHHHTccccHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHTTccccccTTHHHcccTHHHHHHHHHHHTccccHHHHHHHHHHHcccccHHHHHHHHHHT#### DISOP:02AL 1-2| PSIPRED cccHHHHHHccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccccHHHHHHccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHcccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccHHHHHcHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //