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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55199.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  245/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
c.108.1
:288 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   29->243 3fvvB PDBj 2e-19 28.5 %
:RPS:PDB   31->238 2b0cA PDBj 8e-11 11.8 %
:RPS:SCOP  31->243 2g80A1  c.108.1.22 * 1e-11 11.3 %
:HMM:SCOP  29->252 2cn1A1 c.108.1.21 * 3e-28 24.9 %
:HMM:PFM   117->220 PF00702 * Hydrolase 8.7e-07 21.3 94/192  
:HMM:PFM   217->288 PF04600 * DUF571 0.00033 24.3 70/425  
:BLT:SWISS 29->254 Y3661_MYCTU 8e-94 73.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55199.1 GT:GENE BAD55199.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(367515..368381) GB:FROM 367515 GB:TO 368381 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55199.1 LENGTH 288 SQ:AASEQ MTTEDDQPADSGRGAPGAHTANRTTGGARVAAFFDLDKTVIAKSSTYVFSKPFYAQGLLNRRTVLESSYAHFLYLLSGADHDQMERMREHLTKMVAGWDVEQVKSIVAETLHELVDPLIYAEAADLIADHKIRGHDVVIVSASGEEIVAPIAAALGVAHTAATRLVVEDGKYTGEVEFYCYGEGKVTAIEKLAASEGYDLARCYAYSDSITDLPMLGAVGHPTAVNPDRALRREALARGWPVLAFSNPVSLWSRFQSPSSTTVAATAAVGLSAVLAGAISYRLLRKRR GT:EXON 1|1-288:0| BL:SWS:NREP 1 BL:SWS:REP 29->254|Y3661_MYCTU|8e-94|73.0|226/287| SEG 152->162|aaalgvahtaa| SEG 259->278|ssttvaataavglsavlaga| BL:PDB:NREP 1 BL:PDB:REP 29->243|3fvvB|2e-19|28.5|214/221| RP:PDB:NREP 1 RP:PDB:REP 31->238|2b0cA|8e-11|11.8|195/199| HM:PFM:NREP 2 HM:PFM:REP 117->220|PF00702|8.7e-07|21.3|94/192|Hydrolase| HM:PFM:REP 217->288|PF04600|0.00033|24.3|70/425|DUF571| RP:SCP:NREP 1 RP:SCP:REP 31->243|2g80A1|1e-11|11.3|212/225|c.108.1.22| HM:SCP:REP 29->252|2cn1A1|3e-28|24.9|217/0|c.108.1.21|1/1|HAD-like| OP:NHOMO 387 OP:NHOMOORG 252 OP:PATTERN -------------------------------------------------------------------- ---122222222-233233-34223433333344443333-232111-111-1111-1--223-2222321-------111-1-----------------------------------------1-----------------------------------------1-----------------------------------------------------------------------------------------------------------------------------1---1---------------------------11111111121211--222111-2-11--------------------------------------------------------------------------------------------------------------------------------------------------11-111112112112----1121------31211211122122111112111111111111111111111111--1--------------1-------222221-----1---------------------1111--12-1--1----------------------1111--------11--2-------------------------------21--211----------------1---------1111111-1111-------------11221---------------11111111111133332222222221222---------1111111111111-1--------------1111------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------28111-----1--1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 226 STR:RPRED 78.5 SQ:SECSTR #########################TGGGEEEEEcccTTTEEEETHHHHHHHHHHHHHHHHcccHHHHHHHccccHHHHHHHTTcccHHHHHHHHHHHHTccccHHHHHHHHHTcEEEEcHHHHHHHHHHHHTTcEEEEEEcccccTTcccGGGcHHHHHHccEEEEHHHHTccTEEEETcHHHHHHHHHHHHHHTTccGGGEEEEEccHHHHHHHHTTTcEEEEcccTTHHHHHHHcTcTcEEEccHHHH##################################### DISOP:02AL 1-6| PSIPRED cccccccccccccccccccccccccccccEEEEEEccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHcccHHHHHHEEHcccEEEccccccccccHHHHHHHHHHHHHcccHHHEEEEEccHHHHHHHHHccccEEEcccHHHHHHHHHHccEEEccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccc //