[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55201.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  60/68 : Bacteria  366/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:395 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   223->314 2pt7C PDBj 5e-12 41.2 %
:RPS:PDB   220->317 1dmaB PDBj 3e-19 11.0 %
:RPS:SCOP  224->315 1p9rA  c.37.1.11 * 2e-17 31.0 %
:HMM:SCOP  33->354 1g6oA_ c.37.1.11 * 2.1e-52 29.2 %
:RPS:PFM   223->314 PF00437 * GSPII_E 1e-08 49.4 %
:HMM:PFM   56->344 PF00437 * GSPII_E 1.4e-74 40.8 272/282  
:BLT:SWISS 223->297 Y781_METJA 4e-19 60.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55201.1 GT:GENE BAD55201.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 369847..371034 GB:FROM 369847 GB:TO 371034 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55201.1 LENGTH 395 SQ:AASEQ MSALVTAELLERVRQRLAGQSGEPDPAQLAAAIRAEAGGVLGDTDLLRALRLLQTELTGAGLLEPLLHDPRVADVLVTAPDAVWVDRGRGLEKTAITFPDEAAVRRLAQRLALSAGRRLDDAQPWVDGKLAGPGSTLGESFGVRLHAVLAPIAHDGTCLSLRVLRPATQGLDALAASGAVPASAKTLLEKIVRARLALLVVGGTGAGKTTLLSGLLATVDPAERIVCVEDAAELAPPHPHVVRLVARTANVEGVGEVTVRDLVRQALRMRPDRIVVGEVRGAEVVDLLTALNTGHDGGAGTVHANSPREVPARLEALAALGGMTRAALHSQLAAAVQVVLHVQRGADGSRGLREIGLLEPAHDGRVHIVAAWRADGGPAPAAPRLAELFAERSIR GT:EXON 1|1-395:0| BL:SWS:NREP 1 BL:SWS:REP 223->297|Y781_METJA|4e-19|60.8|74/721| SEG 41->58|lgdtdllralrllqtelt| SEG 102->119|aavrrlaqrlalsagrrl| SEG 173->184|alaasgavpasa| SEG 194->218|arlallvvggtgagkttllsgllat| SEG 326->343|aalhsqlaaavqvvlhvq| SEG 370->392|aawradggpapaaprlaelfaer| BL:PDB:NREP 1 BL:PDB:REP 223->314|2pt7C|5e-12|41.2|85/307| RP:PDB:NREP 1 RP:PDB:REP 220->317|1dmaB|3e-19|11.0|91/189| RP:PFM:NREP 1 RP:PFM:REP 223->314|PF00437|1e-08|49.4|87/273|GSPII_E| HM:PFM:NREP 1 HM:PFM:REP 56->344|PF00437|1.4e-74|40.8|272/282|GSPII_E| GO:PFM:NREP 3 GO:PFM GO:0005524|"GO:ATP binding"|PF00437|IPR001482| GO:PFM GO:0005622|"GO:intracellular"|PF00437|IPR001482| GO:PFM GO:0006810|"GO:transport"|PF00437|IPR001482| RP:SCP:NREP 1 RP:SCP:REP 224->315|1p9rA|2e-17|31.0|84/378|c.37.1.11| HM:SCP:REP 33->354|1g6oA_|2.1e-52|29.2|308/323|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 806 OP:NHOMOORG 428 OP:PATTERN 2211-22244444432221111141221-2211113322222562114-441312222222-1--1-- 4-4-511111111111111-11--111111111111111122334222222-45422322115111134221111111114--------------------------------------------11---1121-222243---21--------------------------------------------1----------------------------------------21---------------------------------------------------------------------------------------------------------1-------1-1--212----121--1-----------35225-4223-12143133211111111111113-1111131245314446735545531222131-1211221--------243--1--11111111111111111111111111111-2332-133154333351-22233633333333452345--55311122333131-11-111----------212--3---21-1-11111-2-2----1121112-11-------2-----11111-1-1---2311-----1---1--1---1----1-11-12----1-1---------1--2-----------1---------------------11------------1----------------111111111211---------1112-1-11111-111-------1----------1-12211111----1-111---------11323-----32333321-1--------1----------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 107 STR:RPRED 27.1 SQ:SECSTR ##########################################################################################################################################################################################################################cccccccccTTcccTccHHHHHHHccEEHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHccccccccTTcTTcEEcccHHHHTTccccccEEEEEEEEEHHHHTccT###################################################################### DISOP:02AL 395-396| PSIPRED ccHHccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHcccccEEEEEEccccEEEEEccEEEEEccccccHHHHHHHHHHHHHHcccccHHcccEEEEEEEcccccccccccEEEEEEEccccccccEEEEEEcccccccHHHHHHccccHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHccccccEEEEEcccccccccccEEEEEEEcccccccccccHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHcccccccHHHHHHHHHHHEEEEEEEEEcccccEEEEEEEEEEcccccEEEEEEEEEcccccccccHHHHHHHHHcccc //