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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55215.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  833/915 : Eukaryota  159/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:303 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   18->219 2yyzA PDBj 9e-14 32.3 %
:RPS:PDB   6->219 3dmdC PDBj 4e-27 11.4 %
:RPS:SCOP  18->218 1sgwA  c.37.1.12 * 1e-24 15.5 %
:HMM:SCOP  13->246 1g6hA_ c.37.1.12 * 8.3e-40 28.8 %
:HMM:PFM   56->168 PF00005 * ABC_tran 1.2e-07 26.4 110/118  
:HMM:PFM   28->74 PF03193 * DUF258 2.5e-06 28.3 46/161  
:BLT:SWISS 22->231 YHCG_BACSU 2e-28 31.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55215.1 GT:GENE BAD55215.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 386882..387793 GB:FROM 386882 GB:TO 387793 GB:DIRECTION + GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD55215.1 LENGTH 303 SQ:AASEQ MSATYLDPAVLDTETVASVRGVGMRFGSVTALDDVSFELRANTIYGLLGRNGAGKTTLMQVLTGQQFQTAGEVSVFGATPHENAAVLRDVTFIRESQPYPADYKVKHVLDVARHLLPHWDEDFAQRLLRDFDLPLGRRVKKLSRGMTSALGVIIGLASRAPLTLFDEPYLGLDAVARQLFYDRLLADYAENPRTVVLSTHLIDEVADLLEHVIVIDRGRVVADAAADQLRESAITVAGPVGEVDRFVAGRPELRREALGNQARVLVRTTDHDADVARAGALGLRLEPVSLQQLIVETATTQEQ GT:EXON 1|1-303:0| BL:SWS:NREP 1 BL:SWS:REP 22->231|YHCG_BACSU|2e-28|31.2|208/232| SEG 220->227|vvadaaad| BL:PDB:NREP 1 BL:PDB:REP 18->219|2yyzA|9e-14|32.3|186/358| RP:PDB:NREP 1 RP:PDB:REP 6->219|3dmdC|4e-27|11.4|202/318| HM:PFM:NREP 2 HM:PFM:REP 56->168|PF00005|1.2e-07|26.4|110/118|ABC_tran| HM:PFM:REP 28->74|PF03193|2.5e-06|28.3|46/161|DUF258| RP:SCP:NREP 1 RP:SCP:REP 18->218|1sgwA|1e-24|15.5|194/200|c.37.1.12| HM:SCP:REP 13->246|1g6hA_|8.3e-40|28.8|233/254|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 9403 OP:NHOMOORG 1058 OP:PATTERN 8853828AAACAA8AFE556566AE7ACAF9E2122212232-9F19767EB426A6BE676876-23 9CM5f5B9BBB8D888755-5A229J5555578ABBMNOMCP8QDNEDF876FIB66834KJK9LGISYT75655E5583F6F1-1134362-3232--356447E3A55-------1--1111131143-13393CHHFJ886OBB88A877BB44523332567ACF93431333344213CB8338329BJONONOLMTINONJOOOJEECFNNMDFFEFBJDEFDDFHe8999898788999899B7894374GG54557GG34KK966667566CBC895DECAAAAA89BA9AA7666678788866C795559998FF7HFQQQRTLO8N7LMHHE89AVEDCBHDL75QO7D979A7BD7FF522D5H9AA621-1276TXQ74AGGCIAEFEGECHDEGU-99G84I78He62rKKUXabrjiYVHL455EDGD9FFH7H44444444B78246CD-1-----------1----11-1--1----441223AMKABNHIKIMH989APPSPCCCCBFKMXDCGB-5BC9C9698CEHJMQ598884665-----1-5538A8AAC6435535777525534746468988GI5624342-----1111111111122226452D466664345556535866668563766--22312------GCDC2D5DCCDDECDA9-ACDCEADAEBBEDBBCBBCHGGBG67768686777776777874B988AAC3-7BCCDBCCCCDD-12334444323353C89677968135332228--11-13123A8BBAA8846964686CAB13222232352228243345433265523223343333--2433366611122222F14----2-143132----115--1---7ED875M5B72A4 11--474-EA26361223312212122221---222121211222232331231223122121-------1--1------1------1--212212------1----3-6B8B9DAC7442699SR6M3R*D3B7F9774G65EA5C542I43j5EC7F29U474C2GACN36653233Q42434534523331DAEA3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-7, 301-303| PSIPRED cccccccccccccccEEEEEccEEEEccEEEEEcccEEEEccEEEEEEccccccHHHHHHHHHHcccccccEEEEEcccccccHHHHHHccEEEccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHEEEEEccEEEEEccHHHHHHHHcEEEEcHHHHHHHHHHccccEEEEEcccEEEEEEcccHHHHHHHHHHHccEEEcccHHHHHHHHHHcccc //