[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55217.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  70/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:363 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   57->177 1zoiB PDBj 8e-12 49.1 %
:RPS:PDB   64->350 1cqzB PDBj 2e-23 16.5 %
:RPS:SCOP  59->349 1mt3A  c.69.1.7 * 7e-25 15.4 %
:HMM:SCOP  53->350 1q0rA_ c.69.1.28 * 4.4e-50 35.1 %
:RPS:PFM   147->168 PF00561 * Abhydrolase_1 5e-04 72.7 %
:HMM:PFM   102->349 PF00561 * Abhydrolase_1 4.1e-20 28.6 217/231  
:HMM:PFM   62->135 PF12146 * Hydrolase_4 1.5e-08 32.4 74/79  
:BLT:SWISS 57->179 PRXC_STRLI 1e-10 35.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55217.1 GT:GENE BAD55217.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(388541..389632) GB:FROM 388541 GB:TO 389632 GB:DIRECTION - GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD55217.1 LENGTH 363 SQ:AASEQ MTADTKECAMLVTSMKTLAGVRSTEPLTAAYRAALRSRTYATASLNKPAAPVEIVPVTTVDGARLRVHAYGPADGEVIVLIHGWSCCIEYWHPQINALADRYRVICYDQRGHGESTLGRVAPCADTLADDLATVLDATLPRGRRAVLVGHSMGGITLQAWAARYPEQVPDRAAAVVLANTASKDIRFETDLLPLLNKPLAVANRPLTVFGRGVRMPMVLAETLLTAPVPLPGGPMSPLVTAVLKSRVMTRNATADQAAFALGIVRSCRPLTRGLHAAALADMDLGDAAKNLTVPTTVIAGLHDHLLPERMNRTIVEALKSSGSLADYQVWPTGHLSNVEAADRFNAELAKIAASAYRPQADAV GT:EXON 1|1-363:0| BL:SWS:NREP 1 BL:SWS:REP 57->179|PRXC_STRLI|1e-10|35.6|118/276| SEG 124->139|adtladdlatvldatl| SEG 274->288|lhaaaladmdlgdaa| BL:PDB:NREP 1 BL:PDB:REP 57->177|1zoiB|8e-12|49.1|116/274| RP:PDB:NREP 1 RP:PDB:REP 64->350|1cqzB|2e-23|16.5|284/541| RP:PFM:NREP 1 RP:PFM:REP 147->168|PF00561|5e-04|72.7|22/211|Abhydrolase_1| HM:PFM:NREP 2 HM:PFM:REP 102->349|PF00561|4.1e-20|28.6|217/231|Abhydrolase_1| HM:PFM:REP 62->135|PF12146|1.5e-08|32.4|74/79|Hydrolase_4| RP:SCP:NREP 1 RP:SCP:REP 59->349|1mt3A|7e-25|15.4|273/293|c.69.1.7| HM:SCP:REP 53->350|1q0rA_|4.4e-50|35.1|285/297|c.69.1.28|1/1|alpha/beta-Hydrolases| OP:NHOMO 95 OP:NHOMOORG 71 OP:PATTERN -------------------------------------------------------------------- ------1-------13311-12--2211111122223333-2121---------------111--111121------------------------------------------------------1----------211--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----1-------------------1----1--------1----------------------------------------------------------------------1--------11-11-----11--11--1------1------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------1111----2111-----------------------------111-1-------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 339 STR:RPRED 93.4 SQ:SECSTR ###################ccccHcTTTHHHTccTTccccccccGGGcccccEEEEEEEETTEccEEEEEEEccccEEEEEccTTccGGGGGGHHHHHHHTcEEEEEEcTTcTTcccccccGGGcHHHHHHHHHHHHHHHTcccEEEEEETHHHHHHHHHHHHccTTEEEEEEEccccccccTTccHHHHHHHcGGGHHHHHHTcTTHHHHHHHHTHHHHHHHHcccTTcccccccccccccccccccccHHHHHHHHHHHHHHTTHHHHTTGGGHHHHHHHHGGGTTccccccEEEEEETTcccccGGGGTTGGGTcTTcTTcEEEEEccccccHHHHcHHHHHHHHHHHGGGGccc##### DISOP:02AL 1-4, 40-49, 359-363| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEccEEEEEEEEccccccEEEEEccccccHHHHHHHHHHHHcccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEEEcHHHHHHHHHHHHccHHHHHHHHEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHccccEEEEEccccccccHHHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccccc //