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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55221.1
DDBJ      :             putative non-ribosomal peptide synthetase
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  586/915 : Eukaryota  152/199 : Viruses  0/175   --->[See Alignment]
a.28.1b.81.1e.23.1
:1313 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   31->508 1amuA PDBj 2e-31 27.9 %
:BLT:PDB   528->593 2jgpA PDBj 9e-05 31.8 %
:BLT:PDB   776->824 2p2oD PDBj 1e-05 40.8 %
:RPS:PDB   31->508 1amuB PDBj 1e-38 24.3 %
:RPS:PDB   522->590 1dnyA PDBj 1e-09 23.2 %
:RPS:PDB   729->829 3ectA PDBj 3e-11 19.8 %
:RPS:PDB   1200->1297 3eevB PDBj 1e-08 16.5 %
:RPS:SCOP  31->511 1amuA  e.23.1.1 * 5e-42 22.4 %
:RPS:SCOP  522->590 1dnyA  a.28.1.2 * 2e-12 23.2 %
:RPS:SCOP  729->831 1kqaA  b.81.1.3 * 8e-12 24.3 %
:RPS:SCOP  1201->1311 1xatA  b.81.1.3 * 1e-09 13.7 %
:HMM:SCOP  22->533 1pg4A_ e.23.1.1 * 3.6e-117 39.0 %
:HMM:SCOP  517->591 1dnyA_ a.28.1.2 * 5.1e-14 40.0 %
:HMM:SCOP  700->856 1xhdA_ b.81.1.5 * 9.3e-21 22.3 %
:HMM:SCOP  897->1063 1t3dA_ b.81.1.6 * 8.9e-15 17.4 %
:HMM:SCOP  1171->1303 1xhdA_ b.81.1.5 * 6.8e-16 23.3 %
:RPS:PFM   61->437 PF00501 * AMP-binding 4e-25 37.8 %
:RPS:PFM   531->589 PF00550 * PP-binding 2e-07 46.6 %
:HMM:PFM   61->441 PF00501 * AMP-binding 8.6e-77 38.2 369/418  
:HMM:PFM   527->589 PF00550 * PP-binding 6.2e-14 35.5 62/67  
:BLT:SWISS 27->608 LGRC_BREPA 2e-61 35.7 %
:BLT:SWISS 717->838 DAPH_THEAB 9e-07 28.6 %
:BLT:SWISS 1240->1291 LPXD_BORA1 3e-06 40.4 %
:PROS 167->178|PS00455|AMP_BINDING
:TM
:REPEAT 3|690->823|923->1058|1157->1297
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55221.1 GT:GENE BAD55221.1 GT:PRODUCT putative non-ribosomal peptide synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(392050..395991) GB:FROM 392050 GB:TO 395991 GB:DIRECTION - GB:PRODUCT putative non-ribosomal peptide synthetase GB:PROTEIN_ID BAD55221.1 LENGTH 1313 SQ:AASEQ MTLQPQVDAAADGNRAPGASPDPLYRSVAAPEPRTLVDILDATVAAHPDAPALDDGEVVLSYAELRAEIAERVAELVAAGVRPGDRVGVRMPSGDHRLYVTILAVLYAGAAYVPVDADDPDERAALVFGEARVRVVATGAGIEAAEQAGTDGRPPAAGPSPADDAWIIFTSGSTGTPKGVAVTHRSAAAFVDAEARMFLRDNPIGPGDRVLAGLSVAFDASCEEMWLAWRHGACLVPAPRALVRTGADLGPWLVRREITVVSTVPTLAATWPPEALEAVRLLIFGGEAVPPELAERVAGGDDAGREVWNTYGPTEATVVACAAPLTGEGPIRIGLPLDGWDLAVVDAQGNPVGEGESGELVIGGVGLARYLDPAKDAEKYAPATALGWERAYRSGDLVRKERAGLIFLGRADDQIKLGGRRIELGEIDNALQHLPGVTAAAAAIRTTKAGNKILVGYLTGPGADYDLRAARESLAEHLPAPLVPRLALVDELPTRTSGKVDRDALPWPLPETGRADAEDGLSETGRWVAGLWDAILGAEVTGPDADFFDLGGGSLAAAQLVTALRERHPGIAVADLYDHPRLGALVDFLEQSAPAARVEPRTVVPTPRRAQLTQVLATLPLTTLTGLQWFTWLAIVGNIAAWSGSLPWLPRLSWWWALPAFVLFITPPGRMALCVAGARILLRGVRPGSYPRGGSVHLRLWAAVRLSEASGAENLSGAPWMVPFARALGARIGKGVDLHTLPPVTGMLELGAGCSVEPEVDLSGYWIDGDLVHIGPIEVGAGAVVGSRSILLPGSRIGKNAVIAPGSAVSGRVKADQEWAGSPAVKVGKARHRWPDHTPARARHWVAVFAITSVALAALPIVGLAAGAAWLAWCVRDTTTLGAGLTGAFAALPPAVLIALGVYAAATIVLVRLFSLGLTEGYHPVRSRVGWQAWATERLLDGARTFLFPLYASLLTPLWLRLLGAKVGKHVEASTVLLLPKFTTVADGAFLADDTMIAGYELGGGWLRIGEAKVGKRAFLGNSGMTAPGRRVPKNGLVAVLSAAPSKAKAGSSWVGSPPVRLRRAAESGDTRRTFDPPPSLKLARAAVETCRLLPVLVTFGIGLGVLFAMAWLAQTVGHPAAALLSGVVLLVAGAVACGSAVAAKWLLVGRIRAEEHPLWSSFVWRNEVSDTFVETVAAPWFARAATGTPVLNLWLRALGARIGRGVWCESYWLPEADLVTLGDGATVERGCVVQTHLFHDRIMAMDTVVLEPGATLGPHCVALPAARIGAGATVGPASLVMRGDAVPASTSWWGNPIAPWPRPHPTPTVAER GT:EXON 1|1-1313:0| BL:SWS:NREP 3 BL:SWS:REP 27->608|LGRC_BREPA|2e-61|35.7|566/7756| BL:SWS:REP 717->838|DAPH_THEAB|9e-07|28.6|119/233| BL:SWS:REP 1240->1291|LPXD_BORA1|3e-06|40.4|52/361| PROS 167->178|PS00455|AMP_BINDING|PDOC00427| TM:NTM 5 TM:REGION 847->869| TM:REGION 889->911| TM:REGION 943->965| TM:REGION 1093->1115| TM:REGION 1125->1147| NREPEAT 1 REPEAT 3|690->823|923->1058|1157->1297| SEG 107->121|yagaayvpvdaddpd| SEG 151->165|dgrppaagpspadda| SEG 439->443|aaaaa| SEG 478->489|lpaplvprlalv| SEG 611->628|qltqvlatlplttltglq| SEG 642->659|wsgslpwlprlswwwalp| SEG 863->873|glaagaawlaw| SEG 878->892|tttlgagltgafaal| SEG 1042->1053|saapskakagss| SEG 1121->1144|aaallsgvvllvagavacgsavaa| BL:PDB:NREP 3 BL:PDB:REP 31->508|1amuA|2e-31|27.9|455/509| BL:PDB:REP 528->593|2jgpA|9e-05|31.8|66/520| BL:PDB:REP 776->824|2p2oD|1e-05|40.8|49/183| RP:PDB:NREP 4 RP:PDB:REP 31->508|1amuB|1e-38|24.3|469/508| RP:PDB:REP 522->590|1dnyA|1e-09|23.2|69/76| RP:PDB:REP 729->829|3ectA|3e-11|19.8|101/173| RP:PDB:REP 1200->1297|3eevB|1e-08|16.5|96/205| RP:PFM:NREP 2 RP:PFM:REP 61->437|PF00501|4e-25|37.8|362/405|AMP-binding| RP:PFM:REP 531->589|PF00550|2e-07|46.6|58/67|PP-binding| HM:PFM:NREP 2 HM:PFM:REP 61->441|PF00501|8.6e-77|38.2|369/418|AMP-binding| HM:PFM:REP 527->589|PF00550|6.2e-14|35.5|62/67|PP-binding| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| GO:PFM GO:0048037|"GO:cofactor binding"|PF00550|IPR006163| RP:SCP:NREP 4 RP:SCP:REP 31->511|1amuA|5e-42|22.4|474/510|e.23.1.1| RP:SCP:REP 522->590|1dnyA|2e-12|23.2|69/76|a.28.1.2| RP:SCP:REP 729->831|1kqaA|8e-12|24.3|103/200|b.81.1.3| RP:SCP:REP 1201->1311|1xatA|1e-09|13.7|109/208|b.81.1.3| HM:SCP:REP 22->533|1pg4A_|3.6e-117|39.0|503/643|e.23.1.1|1/1|Acetyl-CoA synthetase-like| HM:SCP:REP 517->591|1dnyA_|5.1e-14|40.0|75/76|a.28.1.2|1/1|ACP-like| HM:SCP:REP 700->856|1xhdA_|9.3e-21|22.3|157/0|b.81.1.5|1/3|Trimeric LpxA-like enzymes| HM:SCP:REP 897->1063|1t3dA_|8.9e-15|17.4|167/262|b.81.1.6|2/3|Trimeric LpxA-like enzymes| HM:SCP:REP 1171->1303|1xhdA_|6.8e-16|23.3|133/0|b.81.1.5|3/3|Trimeric LpxA-like enzymes| OP:NHOMO 3468 OP:NHOMOORG 767 OP:PATTERN -------33223221--12----122211143-----------322323-111---------1----- 2111J421112431DDD55-5511OB55555A8656LDVR1J6B3--3162-523227--JH31T8RLES5---------125-----331--1-------8--1F---2-------------------1------11146---U-57B2CCC-----1------1-F9P1-------1----21133--15-H223237254253683--779D229133721-111111L2122222222222222122111111111112113111111111-111111112115411111111111111111111-1111111221111----31111511112F255------31-4111-332--1--21111----3-21--4-----4642B---4A4341111111111--4414474537--6669111112313511132611221431111111111--1212------------------------------23A1-311-26BCACDIADD96678RSRR7LC6B88B2--11912822712294--41---411111111214522-32--223363221-111-2-11-2222UE3511-1-111111------------11--44---31-1-------7----------------131-------82E72113229398433-235323434424422322212277NP1111111111111111132212233--143434311232---113121222233O-8---------------33333-2---83DFBELEDD487862GHL-------------52333321-112241211111-------------------------------------------------------------7- ----1-2-----228CEE8HJSLVTPR678777HLHB697777677D7CRMIEEC8HD8232111----1--1----------11-23-372E5611111215111-1B2511-1251-1-11134-2-6K3-3341-122-13-2121141-7231131131533111223431---1C111121--4I--2-34117 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 906 STR:RPRED 69.0 SQ:SECSTR #############ccEEcEccccccccccccTTccHHHHHHHHHHHcTTcEEEEETTEEEEHHHHHHHHHHHHHHHHHHTccTTcEEEEEccccHHHHHHHHHHHHHTTcEEEEccTTccHHHHHHHHHHHcccEEccccccEEEEcccccGGGcccccccccccTTcEEEEEEccccEEEEEHHHHHHHHHHHHHTcHTcccccTTcEEEEcccTTcTHHHHHHHHHHTTTcEEEEccHHHHTcHHHHHHHHHHTTccEEEEcHHHHTTccTTTcccccEEEEEcccccHHHHHHHTHHHcTTcEEEEEEccGGGccccEEEEccccccccccEEcTTEEEEEEcTTcccccTTccEEEEEEETTcccTTcHHHHHHHEEEccccTTcEEEEEEEEEEEcTTccEEEEEGGGEEEETTEEEEHHHHHHHHHTcTTEEEEEEEEEEcTTccEEEEEEEEEcccccHHHHHHHHHHHccGGGcccEEEEcccccccTTccccGGGccccHccTTTTEEEEEEGGHHHHHcGGGHHHHHHHHHccEEEEEEcccEEEHHHHHHHHHHcGGccccHHHHHHcccHHHHHHHHHEccccccccEcccEE####################################################################EEETTcEEccccEEccccEEEEEEEcTTcEEccEEEEEEEEcTTcEccccccEEETEEEccccEEcTEEEccccEEEccccEEcTTcEEEcEEccccGGGGTTEEEcTTcEEcTTcEEcTTcEEcTTcEEcTTcEEcccccccEEEETTTTEEEEETTTcccHHHHHHHHHHHHHHHH#####################################################################################################################################################################################################################################################################################################################################HHHHHHHHHHHcccHHHHHHHHHEEEEcTTcEEcTTcEEEEEEEEEccccEEcTTcEEEccTTccEEEcTTccEEcTTcEEcTTcEEcTTcEEcTTcEEcTTcEEcTTcEEcTTEEEEETTcccc#TTTTcccEEEc DISOP:02AL 512-516, 592-603, 1309-1313| PSIPRED ccccccHHHHcccccccccccHHHcccccccccccHHHHHHHHHHHccccEEEEEcccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHcccEEEEEccccHHHHHHccccccccccccccccEEEEEcccccccccEEEEcHHHHHHHHHHHHHHHHHccccccccEEEEEcccHHHHHHHHHHHHHHHccEEEEcccHHHccHHHHHHHHHHccccEEEHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHcccccEEEEccccccHHEEEEEccccccccccccccccccEEEEEcccccccccccEEEEEEccccccccccccccHHHHHccccccccccEEEccEEEEccccEEEEcccccEEEEccEEEcHHHHHHHHHHccccEEEEEEEEccccccEEEEEEEEcccccccHHHHHHHHHHHcccccccEEEEEEccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccccccHHHHcccHHHHHHHHHHHHHccccccHHHHHccccHHHHHHHHHHcccccccccccccccccHHHHHHcccccccHHHHHHHHHHHHHccccccccccccccEEEccccHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccEEEEccccccccEEEcccEEEccccEEEcEEEEccEEEEEEEEEcccEEEcccEEEccccEEccccEEccHHHHccccccccEEcccccccccccccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccEEEEEcHHHHHHHHHHHHHcccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccHHcccccHHHHHHHHHcccEEcccEEEEEEEEEEEEEEEcccEEcccccccccccEEEEEEcccccccccccccccccccccHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccEEccccEEccccccccccEEEcccEEEccccccccccccccEEEEcEEEEcccEEEcccEEEEccEEEccccEEccccEEEEcccccccccccccccccccccccccccccc 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