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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55224.1
DDBJ      :             putative flavin-dependent oxidoreductase
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  264/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
b.45.1
:183 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   30->182 2qckA PDBj 1e-14 34.0 %
:RPS:PDB   22->180 2d37A PDBj 5e-34 29.2 %
:RPS:SCOP  22->177 1rz0A  b.45.1.2 * 6e-38 27.0 %
:HMM:SCOP  17->178 1uscA_ b.45.1.2 * 3.1e-43 33.3 %
:RPS:PFM   33->173 PF01613 * Flavin_Reduct 1e-17 39.1 %
:HMM:PFM   29->177 PF01613 * Flavin_Reduct 1.1e-36 38.9 144/155  
:BLT:SWISS 23->179 SNAC_STRPR 1e-19 37.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55224.1 GT:GENE BAD55224.1 GT:PRODUCT putative flavin-dependent oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(398432..398983) GB:FROM 398432 GB:TO 398983 GB:DIRECTION - GB:PRODUCT putative flavin-dependent oxidoreductase GB:PROTEIN_ID BAD55224.1 LENGTH 183 SQ:AASEQ MSEAPRPETGIRIPDDLSGITAEQYRASMRHYPAGVTVVTLDSPAGPVGFTATSFASLSLEPPLVSFNIAHTSSSLTAMLAADSVVIHFLGEHQRHIAQRFSRTAAERFADHSLWTTLETGEPVLHGTPIWVRAAVHQLIPIGDHTFVVGLVTRVHDDTDESPSAAPLLYYNGRYHRPTALDG GT:EXON 1|1-183:0| BL:SWS:NREP 1 BL:SWS:REP 23->179|SNAC_STRPR|1e-19|37.0|154/176| BL:PDB:NREP 1 BL:PDB:REP 30->182|2qckA|1e-14|34.0|144/155| RP:PDB:NREP 1 RP:PDB:REP 22->180|2d37A|5e-34|29.2|154/155| RP:PFM:NREP 1 RP:PFM:REP 33->173|PF01613|1e-17|39.1|138/150|Flavin_Reduct| HM:PFM:NREP 1 HM:PFM:REP 29->177|PF01613|1.1e-36|38.9|144/155|Flavin_Reduct| RP:SCP:NREP 1 RP:SCP:REP 22->177|1rz0A|6e-38|27.0|148/153|b.45.1.2| HM:SCP:REP 17->178|1uscA_|3.1e-43|33.3|159/178|b.45.1.2|1/1|FMN-binding split barrel| OP:NHOMO 558 OP:NHOMOORG 284 OP:PATTERN ------1111111111-1-----------1-------------------------------------- --1-4--12221--32233-331133333333544464ED-33612-1-221452112--322-3123451-----------2-------------------------1---------------------------11111---1--------------------------------------11111---2-----------------1---------1211--------------------------------------------------------------------------------------------------------------------------------1---------------------1--211------1132112-1-121--11-111112-22-21-1-3-1-4445221325433522--11312221221222222-11-111111111111----1111111111111------3-1-311112333344111133412211214132532--11211111212141111-----------------43-----------------------------1--------------------------------1-----1----------------------------------1------------------------------------1-11-------------------1---------1----------------------------3111------------44434151111-11114133235331222------------------------11----------------------------------------------------------------------- ------------111----------------------------------------------------------------------------------------111-1--------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 169 STR:RPRED 92.3 SQ:SECSTR #############TTTcccccHHHHHHHHTTccEEcEEEEEEETTEEEEEEEcccEEEETTTTEEEEEEEGGGTTTHHHHTccEEEEEEEccHHHHHHHHHccGTGGGGGcccEEEEcGGGcEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEEcccccccccccEEETTEEEcccccc# DISOP:02AL 1-6, 8-20, 179-183| PSIPRED cccccccccccccccccccccHHHHHHHHHHccccEEEEEEEccccEEEEEEEEEEEEEccccEEEEEEcccccHHHHHHHccEEEEEEccHHHHHHHHHcccccccccccccEEccccccccEEcccEEEEEEEEEEEEEcccEEEEEEEEEEEEEEcccccccccEEEEcccccccccccc //