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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55229.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  56/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.92.1
:368 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   27->366 3cmnA PDBj 1e-35 35.5 %
:RPS:SCOP  51->366 3cmnA1  d.92.1.16 * 1e-15 35.3 %
:RPS:PFM   27->363 PF10103 * DUF2342 1e-40 42.3 %
:HMM:PFM   27->363 PF10103 * DUF2342 1.7e-108 40.1 332/342  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55229.1 GT:GENE BAD55229.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 402695..403801 GB:FROM 402695 GB:TO 403801 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55229.1 LENGTH 368 SQ:AASEQ MFEGADETDTAAGTTESPRRSGLSGAVDWRLAARTGAALVPAGPRTSRYSAEQVVAELAASSIRAEGPVREVSGLLDDQPVPEARIVDRPGWISAAADSMSTLTGTGAQADTGFKGRLAGKPAGVQAGAMLAFLSTAILGQYDPFTGPDGTLLLVAPNIMAVERALGVSPTDFRFWVCLHEVTHRVQFSSAPWLADYMRSNVDVLGEVGEEPLAEMLSRLVAEVRERRRGGVPDDPANRGVIGLLRATQAPPQREALDRLLMLGTLLEGHADHVMDAVGPAVIPTVAQIRAAFDKRRQRPANPIQRILRALLGVDAKVAQYVRGKAFVDHVVGRVGMASFNTVWTDAETLPRTDEIEDPDRWIARVLN GT:EXON 1|1-368:0| SEG 3->16|egadetdtaagtte| SEG 223->236|evrerrrggvpddp| BL:PDB:NREP 1 BL:PDB:REP 27->366|3cmnA|1e-35|35.5|290/298| RP:PFM:NREP 1 RP:PFM:REP 27->363|PF10103|1e-40|42.3|324/340|DUF2342| HM:PFM:NREP 1 HM:PFM:REP 27->363|PF10103|1.7e-108|40.1|332/342|DUF2342| RP:SCP:NREP 1 RP:SCP:REP 51->366|3cmnA1|1e-15|35.3|269/294|d.92.1.16| OP:NHOMO 68 OP:NHOMOORG 64 OP:PATTERN ------------------------11111111------------------------------------ ---11---------11111-11--1111111111111111111121--1---111111--211-1221111-----------1-----------------------------------------------------11111---11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 290 STR:RPRED 78.8 SQ:SECSTR ##########################ccHHHHHHHHHHHHTGcccccHHHHHHHHHHHHHHH###HHHHHHHHTccccccccEEEEccHHHHHHHHHHHHHHTTHHHHHHH#####HccHHHHHHHHHHHHHHHHTTcccTTcHHHHcccEEEEcHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHTcTHHHHHHH###############HHHHHHHTc##########################cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTHHHHHHHHHHHHHHHHHHHHHHHH#HTTcccccccccHHHHHHHHHHHHHcHHHHGGGGccGGGcccHHHHHcHHHHHHHH## DISOP:02AL 1-24, 225-239, 295-305| PSIPRED cccccccHHcccccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcHHHHccccccccccccHHHHccHHHHHHHHcc //