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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55230.1
DDBJ      :             hypothetical protein
Swiss-Prot:TILS_NOCFA   RecName: Full=tRNA(Ile)-lysidine synthase;         EC=6.3.4.-;AltName: Full=tRNA(Ile)-lysidine synthetase;AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase;

Homologs  Archaea  0/68 : Bacteria  174/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.26.2d.229.1
:318 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   111->197 1wy5A PDBj 5e-06 31.0 %
:RPS:PDB   111->200 2c5sA PDBj 1e-10 13.4 %
:RPS:SCOP  114->197 1wy5A1  c.26.2.5 * 1e-14 32.1 %
:HMM:SCOP  6->223 1ni5A1 c.26.2.5 * 8.7e-40 38.4 %
:HMM:SCOP  200->297 1wy5A2 d.229.1.1 * 1.1e-11 35.6 %
:RPS:PFM   114->187 PF01171 * ATP_bind_3 6e-09 47.3 %
:HMM:PFM   21->189 PF01171 * ATP_bind_3 2.7e-32 35.7 168/182  
:HMM:PFM   237->307 PF09179 * TilS 6.6e-10 32.8 67/69  
:BLT:SWISS 1->318 TILS_NOCFA e-101 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55230.1 GT:GENE BAD55230.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 403843..404799 GB:FROM 403843 GB:TO 404799 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55230.1 LENGTH 318 SQ:AASEQ MLRHAVRGWLAEHLPGAAPAVAVALSGGADSLALTAAAVVEAATVDALVVDHGLQPGSDAVAVAAAAQARTLGCRSARVLRVRVGSDGGLEAAAREARYAALGSARAGLPVLLGHTLDDQAETVLLGLARGSGARSIRGMAAYTPPWGRPLLGVRRADTRRLCADLGLTPHEDPHNRSAEFTRVRLRTEVLPLLEDVLGGGVAEALARTGRQLREDGAVLDALAADLASAAADAGDLRIETLATAPAALRRRAVRAWLLDSGAKAPTDRQLRAIDALVTAWRGQGGVAVGGGTPGMRLVAARERGRLTLRRQARSPAR GT:EXON 1|1-318:0| SW:ID TILS_NOCFA SW:DE RecName: Full=tRNA(Ile)-lysidine synthase; EC=6.3.4.-;AltName: Full=tRNA(Ile)-lysidine synthetase;AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase; SW:GN Name=tilS; OrderedLocusNames=NFA_3880; SW:KW ATP-binding; Complete proteome; Cytoplasm; Ligase; Nucleotide-binding;tRNA processing. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->318|TILS_NOCFA|e-101|100.0|318/318| GO:SWS:NREP 5 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0008033|"GO:tRNA processing"|tRNA processing| SEG 14->29|lpgaapavavalsgga| SEG 32->51|laltaaavveaatvdalvvd| SEG 60->69|avavaaaaqa| SEG 89->105|gleaaarearyaalgsa| SEG 216->237|dgavldalaadlasaaadagdl| SEG 242->259|latapaalrrravrawll| SEG 283->295|gqggvavgggtpg| BL:PDB:NREP 1 BL:PDB:REP 111->197|1wy5A|5e-06|31.0|87/311| RP:PDB:NREP 1 RP:PDB:REP 111->200|2c5sA|1e-10|13.4|82/372| RP:PFM:NREP 1 RP:PFM:REP 114->187|PF01171|6e-09|47.3|74/185|ATP_bind_3| HM:PFM:NREP 2 HM:PFM:REP 21->189|PF01171|2.7e-32|35.7|168/182|ATP_bind_3| HM:PFM:REP 237->307|PF09179|6.6e-10|32.8|67/69|TilS| RP:SCP:NREP 1 RP:SCP:REP 114->197|1wy5A1|1e-14|32.1|84/216|c.26.2.5| HM:SCP:REP 6->223|1ni5A1|8.7e-40|38.4|216/0|c.26.2.5|1/1|Adenine nucleotide alpha hydrolases-like| HM:SCP:REP 200->297|1wy5A2|1.1e-11|35.6|90/0|d.229.1.1|1/1|MesJ substrate recognition domain-like| OP:NHOMO 182 OP:NHOMOORG 177 OP:PATTERN -------------------------------------------------------------------- -111111111111111111-1111111111111111111111111111111111111111--111111111-111111---------------1----------1--11------------------------1-----111111-111111-----111111----1111-1-1---1-1--1----------111111111111111------111111-----------------------------------------------------------------------------------------------------------11111-----11--------1--1---1--111-1--1------------------------11---------------------------------------------1-1111-1111--------------------------------------------------------------------------------------------1-----1---1---1-----------------111---------1-------1-1----1--1--------------------------------------------------1------------1-------------------------------------------------------------------------------------------------------1------------------------------------11-----11------------------------11---------------------------------1--------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------16----1-------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 105 STR:RPRED 33.0 SQ:SECSTR #############################################################################################################HEEcccccccTTcccHHHHHHHGGGccccEEccEETTEEcTTTTccHHHHHHHHHHTTcHHHHTccccccHHHHHHTTcccHHHHHHHHHHTHHHHHHHHHHHHH######################################################################################################## DISOP:02AL 315-318| PSIPRED cHHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHccccccccccccccccEEEccccccHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccccEEEEEEEEEEccEEEEEEccccccc //