[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55235.1
DDBJ      :             putative aldehyde dehydrogenase
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  797/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.82.1
:538 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   25->445 3ifgA PDBj 2e-61 37.0 %
:RPS:PDB   27->486 2bhpA PDBj 4e-88 26.2 %
:RPS:SCOP  27->486 1uzbA  c.82.1.1 * 2e-90 26.2 %
:HMM:SCOP  30->488 1uzbA_ c.82.1.1 * 3.9e-141 44.7 %
:RPS:PFM   38->446 PF00171 * Aldedh 3e-69 45.7 %
:HMM:PFM   31->485 PF00171 * Aldedh 4.9e-136 46.2 446/462  
:BLT:SWISS 82->460 GABD2_MYCS2 3e-75 45.3 %
:PROS 258->265|PS00687|ALDEHYDE_DEHYDR_GLU
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55235.1 GT:GENE BAD55235.1 GT:PRODUCT putative aldehyde dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(412153..413769) GB:FROM 412153 GB:TO 413769 GB:DIRECTION - GB:PRODUCT putative aldehyde dehydrogenase GB:PROTEIN_ID BAD55235.1 LENGTH 538 SQ:AASEQ MTNTESAPKQATKAQAATPVEPAPSAPGPDVIEVRNPGTGELVGTVPAQGADEVATTVRKLREHQAAWEALGPDGRKEWLLKMQDWIIDNTELLADVLQSETAKARGDALIDPAFGADLIGYYARRAAKFLADEHPSPHSPLARVKKLTVAYRPYPVVGVITPWNFPLAMPIMDVFPALAAGASVVLKPSEVTPLSALELARGWAEIGAPPVFAVVTGAGATGAAVIDNVDYVQFTGSTATGRKIAAACVERMIPYSLELGGKDPAIVLADADLERAANGIAFGGMFNAGQVCISVERVYVEAPVYDEFVAKLTEKVRALRQGLDDRSIKHDLGALANENQVRIVQRHVEEAVAAGAKVLTGGKRTGQGTFFEPTVLVDVDQSMSCITEETFGPTLPVVKVADEDEAIRFANDSIYGLSASVWTGDKERGERIARQLDAGAVNINDVFANLFSFALPMGGWGLSGVGARWGGAAGVRKYCRQKAITKPILPTQERELFWYPYKLPNLLAAVGTMRLAGARGLRRINIPALLTLKRNSE GT:EXON 1|1-538:0| BL:SWS:NREP 1 BL:SWS:REP 82->460|GABD2_MYCS2|3e-75|45.3|373/517| PROS 258->265|PS00687|ALDEHYDE_DEHYDR_GLU|PDOC00068| SEG 7->19|apkqatkaqaatp| SEG 208->226|gappvfavvtgagatgaav| SEG 465->477|gvgarwggaagvr| BL:PDB:NREP 1 BL:PDB:REP 25->445|3ifgA|2e-61|37.0|416/482| RP:PDB:NREP 1 RP:PDB:REP 27->486|2bhpA|4e-88|26.2|455/516| RP:PFM:NREP 1 RP:PFM:REP 38->446|PF00171|3e-69|45.7|403/440|Aldedh| HM:PFM:NREP 1 HM:PFM:REP 31->485|PF00171|4.9e-136|46.2|446/462|Aldedh| GO:PFM:NREP 3 GO:PFM GO:0008152|"GO:metabolic process"|PF00171|IPR015590| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00171|IPR015590| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00171|IPR015590| RP:SCP:NREP 1 RP:SCP:REP 27->486|1uzbA|2e-90|26.2|455/516|c.82.1.1| HM:SCP:REP 30->488|1uzbA_|3.9e-141|44.7|454/516|c.82.1.1|1/1|ALDH-like| OP:NHOMO 9834 OP:NHOMOORG 1043 OP:PATTERN 221-1-4754454653-312111-A4432-521-11111111211222124431-1--1-13351--1 6994L84699D436JPK9A-9N22Ic99999ERQWSMU**8M4U66671744UFNC99--BCM2CENKIJ9----111-122H11111--12-211---42627484656--------------12222221221277787---64455334313111113122324555411111111111175756-1-C89999998AAAA99887EDAA6B9AB9HFDF86222221D54555555555555558667711112311111121122-11122---2222111-221111111111122212222222221--111---2-11162223223221-211-2223113131---2211---1--1---1117-5HEEA11111B6GBK5469A797FGHIFDHCHGH-45D43I6ANOB-NJJLLLWRNYQQE99C5AHQCAAC8IIEDEEEEEEADC6456811111111----1111-1111-11-11118APbA2BOKDDdYaaYbRKKKGaZbePPNMBNuVuMaUK14GCFC9CB9GDMCKQ333-112A62444444132AB664413331332223-3333435443333BB15211322211111111111112-11143981894K7DB99AAAA9AB888987AB9AD---5321------A967587B998B878BC-9CAC988C7B98ABBABB9IJI99894A98998999A77A797J773667621466687657888--1633122888817DKW222112-----2223KJMGI7G7C9G1JJJJLPNUGRRNOCKHJ3211132122433A566668B88B8998987555------11441111--------2-2----1---1-12-111-12--111111112-2-2-33- ----CC9-A54-9B7FHLKQNQKRRPPEECCCCDEDEFEEEEECDDDDKUTeyoMMFBDDDDC9B5994A77D89884888998AB57-JUEHCGEDBB8A9FFCF-9LBXPiHLONDBDAEKFPO8VBu*Q-SOVCEC9SEEODAGCCBH87ZCEDGNJcXCOFA9LBFGAJLC5665*55559JFcTLIg77TFMJG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 493 STR:RPRED 91.6 SQ:SECSTR ####################EEEcccccccEEEEEcTTTTcEEEEEEcccHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHGGGGccEccccccccccTTEEEEEEEEEccEEEEEcccccTTHHHHHHHHHHHHTTcEEEEEccGGGHHHHHHHHHHHHHHTccTTcEEEccccTTTHHHHTTccEEEEEccHHHHHHHHHHHTccccEEEEEccccEEEEEcTTccHHHHHHHHHHHHHGGGGccTTcEEEEEEEHHHHHHHHHHHHHHHTTcccccccGGGcccccccccHHHHHHHHHHHHHHTTTcEEEEccccccccccccccEEEEcccTTcGGGTccccccEEEEEEEccHHHHHHHHHccccccEEEEEcccHHHHHHHHHHccccEEEEccccccccTTTccccccGGGccccccTcHHHHHTTEEEEEEEccEEEccccccccccccccEEETTccc######################### DISOP:02AL 1-5, 536-538| PSIPRED cccccccccccccHHHccccccccccccccEEEEEccccccEEEEEccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccEEEEEEEcccEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHcccccEEEEcccHHHHHHHHHHHHccccEEEEEEcccccEEEcccccHHHHHHHHHHHHHHccccEEEcccEEEEEccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEccccccccEEEccEEEccccccccEEEEcccccEEEEEEcccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccHHHHHHHHccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHcccEEcccEEEEEEcccc //