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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55247.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  98/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.100.1c.2.1
:292 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   90->198 3dfuB PDBj 3e-05 37.6 %
:RPS:PDB   1->194 3egoB PDBj 2e-04 12.0 %
:RPS:SCOP  2->115 2f1kA2  c.2.1.6 * 6e-05 20.9 %
:RPS:SCOP  166->238 2i76A1  a.100.1.10 * 2e-06 25.9 %
:HMM:SCOP  1->123 2amfA2 c.2.1.6 * 1e-05 28.4 %
:RPS:PFM   1->115 PF10727 * Rossmann-like 5e-23 59.1 %
:RPS:PFM   139->236 PF10728 * DUF2520 9e-14 60.0 %
:HMM:PFM   2->115 PF10727 * Rossmann-like 8.8e-53 71.1 114/127  
:HMM:PFM   132->275 PF10728 * DUF2520 3.4e-47 58.5 130/132  
:BLT:SWISS 1->102 ASPD_BRAJA 5e-06 27.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55247.1 GT:GENE BAD55247.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 425098..425976 GB:FROM 425098 GB:TO 425976 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55247.1 LENGTH 292 SQ:AASEQ MGIVSAGRVGSALGAALERAGHVVFGVAAISDASKHRARTRLPDSEILPVEQVAARSELLLLAVPDAELPGLVRGLATATVVRPGTIVAHTSGANGVGVLAPLAERGALPLAIHPAMTFTGHDEDLSRLGNACFGITAADDVGYAIAQSLVIEMGGEPVRVAEENRTLYHAALAHGSNHLVTLVLDAVQALREALAGPGLLGQQTVDDQPGGLAERLLAPLASAALDNALRRGQSALTGPVARGDADAVAAHLAALAAADPRVAEGYRALSLRTAQRADTNPALIDLLEGRR GT:EXON 1|1-292:0| BL:SWS:NREP 1 BL:SWS:REP 1->102|ASPD_BRAJA|5e-06|27.7|101/280| SEG 239->264|gpvargdadavaahlaalaaadprva| BL:PDB:NREP 1 BL:PDB:REP 90->198|3dfuB|3e-05|37.6|93/222| RP:PDB:NREP 1 RP:PDB:REP 1->194|3egoB|2e-04|12.0|191/291| RP:PFM:NREP 2 RP:PFM:REP 1->115|PF10727|5e-23|59.1|115/120|Rossmann-like| RP:PFM:REP 139->236|PF10728|9e-14|60.0|85/132|DUF2520| HM:PFM:NREP 2 HM:PFM:REP 2->115|PF10727|8.8e-53|71.1|114/127|Rossmann-like| HM:PFM:REP 132->275|PF10728|3.4e-47|58.5|130/132|DUF2520| RP:SCP:NREP 2 RP:SCP:REP 2->115|2f1kA2|6e-05|20.9|110/165|c.2.1.6| RP:SCP:REP 166->238|2i76A1|2e-06|25.9|58/103|a.100.1.10| HM:SCP:REP 1->123|2amfA2|1e-05|28.4|116/0|c.2.1.6|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 99 OP:NHOMOORG 98 OP:PATTERN -------------------------------------------------------------------- ----1------1-111111-11111111111111111111111111111111111111--111-1111111--------------------------------------------------------------------1-1111----------------------------------------------1-------------------------------------------------------------1---------------------------------------------------------------------1------------------------1----1-1111211--1111-1------1---------------------------------------------------------------------------------------------------------------------------------11-1-1-------------------------------------11-----11---------------11-----------1-1----1-------1--------------------------------------------------------------------------------------------------------------------------------------------------------------11111------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 198 STR:RPRED 67.8 SQ:SECSTR EEEEcccHHHHHHHHHHHTTTcEEEEEHHHHHHHHHcEEEEETTEEEEEEccccccccEEEEcccGGGHHHHHHHHHTcHHcccEEEEcccccHHHHHHHTcccccEEEEEEEccEEEEccccEEEEEcccEEEEEcTTccTHHHHHHHccccTTccEEEcccHHHHHHHHHHHHHHHHHHHHHHTccTTHHHHTccH############################################################################################## PSIPRED cEEEEccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHccccccccHHHHHccccEEEEEccHHHHHHHHHHcccccccccccEEEEcccccHHHHHHHHHHcccEEEcccccccccccHHHHHHccccEEEEEcccHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHcc //