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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55260.1
DDBJ      :             putative two-component system response regulator
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  732/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:220 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->211 3c3wB PDBj 1e-22 31.2 %
:RPS:PDB   3->216 3c3wA PDBj 1e-26 33.3 %
:RPS:SCOP  1->198 1s8nA  c.23.1.1 * 3e-22 25.9 %
:RPS:SCOP  169->216 1fseF  a.4.6.2 * 2e-14 31.2 %
:HMM:SCOP  1->133 1k68A_ c.23.1.1 * 3.7e-32 38.3 %
:HMM:SCOP  133->219 1p4wA_ a.4.6.2 * 1.3e-21 46.0 %
:RPS:PFM   30->111 PF00072 * Response_reg 7e-12 45.6 %
:RPS:PFM   155->206 PF00196 * GerE 4e-11 61.5 %
:HMM:PFM   5->118 PF00072 * Response_reg 2.1e-32 43.2 111/112  
:HMM:PFM   153->209 PF00196 * GerE 4.5e-21 43.9 57/58  
:BLT:SWISS 3->216 YXJL_BACSU 2e-40 42.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55260.1 GT:GENE BAD55260.1 GT:PRODUCT putative two-component system response regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(436832..437494) GB:FROM 436832 GB:TO 437494 GB:DIRECTION - GB:PRODUCT putative two-component system response regulator GB:PROTEIN_ID BAD55260.1 LENGTH 220 SQ:AASEQ MSIRVLVADDQALVRGGFVALLAAQEGIEVVGEADDGEQAVRLTRELRPDVVLMDIRMPVLDGLAATRTIAADPALTDVRVVVLTTFELDEYVFEAMRAGATGFLVKHTEPADLVRAVRVVAAGDALLSPGVTRRLITEFAAHAKQPPPAALAELTDREREVMALVAEGLTNAEIGARLYLSPATARTHVSRILTKLGARDRTQLVVLAYESGLVRPGWS GT:EXON 1|1-220:0| BL:SWS:NREP 1 BL:SWS:REP 3->216|YXJL_BACSU|2e-40|42.0|212/218| SEG 112->128|adlvravrvvaagdall| BL:PDB:NREP 1 BL:PDB:REP 3->211|3c3wB|1e-22|31.2|205/210| RP:PDB:NREP 1 RP:PDB:REP 3->216|3c3wA|1e-26|33.3|210/211| RP:PFM:NREP 2 RP:PFM:REP 30->111|PF00072|7e-12|45.6|79/111|Response_reg| RP:PFM:REP 155->206|PF00196|4e-11|61.5|52/57|GerE| HM:PFM:NREP 2 HM:PFM:REP 5->118|PF00072|2.1e-32|43.2|111/112|Response_reg| HM:PFM:REP 153->209|PF00196|4.5e-21|43.9|57/58|GerE| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 1->198|1s8nA|3e-22|25.9|189/190|c.23.1.1| RP:SCP:REP 169->216|1fseF|2e-14|31.2|48/50|a.4.6.2| HM:SCP:REP 1->133|1k68A_|3.7e-32|38.3|133/0|c.23.1.1|1/1|CheY-like| HM:SCP:REP 133->219|1p4wA_|1.3e-21|46.0|87/0|a.4.6.2|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 4560 OP:NHOMOORG 768 OP:PATTERN -----------------------21111-113---2--2222213-1612324-2-2122-------- 8IL3j85644331475544-47116F444444DCCCELWQBD7aGRA76CB86A876B1189J8cGPYnbB4222944-3419-1111---2-1-----4-6133G4D83-------------------1------HIJIK78AN8C49B444221111-222573GDDG1-------1--1-5863222279B777778995A77888EEDD9D7B96BC8834444444Qg444444434344443444432---22-1--122-122221-1-111122221233333333333333111111111111142222222228E5BC3333443132C2333332956-1G3352B8868588555277221D337777-----14F6E2145477811111111111-7876A7A7175-622321445266321235214345233--------1332293411-----------------------1-11-3243143222979DB8A7775777I888839BD9AJGD-1896ICB46C9ACB77769A78821111111235BDI-98214C62A655A196C58CC56CEGDE963--------------------13-1---7625A663531798994766794665748B--11556------74454745665554555-6555556555655555555444555427577777777677777555655552-666666566666--2444444111114D2411111211111-112222222322246DCEDEICFCDDDC8CBC---------234466777747677EDDBEBB88B44441181554433--------2---------------------------11222232223U- --------------------------------------------------------------1--------------------------------------1-------------------------------------------------------------2---------2-----------3--1---1-5---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 220 STR:RPRED 100.0 SQ:SECSTR ccEEEEEEcccHHHHHHHHHHHHTcTTEEEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTHcTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHHHHETHccTTTTccHHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccccHHHHHHHHHTTTcHHHH DISOP:02AL 136-154| PSIPRED ccEEEEEEcccHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHccccEEEcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccc //