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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55261.1
DDBJ      :             putative two-component system sensor kinase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  116/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.122.1
:401 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   191->333 3gigA PDBj 2e-07 29.0 %
:RPS:PDB   191->375 3ehjA PDBj 6e-14 20.1 %
:RPS:PDB   352->401 2bu7A PDBj 4e-07 10.0 %
:RPS:SCOP  264->383 1l0oA  d.122.1.3 * 7e-07 15.8 %
:HMM:SCOP  253->381 1b3qA3 d.122.1.3 * 5.3e-12 20.9 %
:HMM:PFM   183->247 PF07730 * HisKA_3 4.7e-20 43.1 65/68  
:HMM:PFM   296->381 PF02518 * HATPase_c 9.8e-10 24.4 86/111  
:HMM:PFM   37->101 PF09913 * DUF2142 0.00052 28.6 63/389  
:BLT:SWISS 191->375 NARX_SHIFL 3e-12 33.1 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55261.1 GT:GENE BAD55261.1 GT:PRODUCT putative two-component system sensor kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(437491..438696) GB:FROM 437491 GB:TO 438696 GB:DIRECTION - GB:PRODUCT putative two-component system sensor kinase GB:PROTEIN_ID BAD55261.1 LENGTH 401 SQ:AASEQ MSTAAITRIGRDWGLALVVAVAQIGLSRPANLNQTGVRALDLLGYLLLVAGPIALVFRRRAPLPVLAVTLAACAGYLLGGYGYGPVFLALVVAFLTAATRGSRWWTYPLLPIGYLAFVWPLPVLLGEAVNGWQLVGIGAWLAVLGSIAEGVRQRRAAVEARAQRAEAARRDAEAQRRRRASEERLSIARELHDVLAHSLSLINVQSSVALALFDAEPEQARSALAAIKTASKDSLAEVHTLLETIRAGAPLGPPEPAPGIGDPDALVRPARDAGLAVRVTVRGEPRPLPSVIDVAAARIVREALTNVVRHAPGAAAEVCVRYGPASVEITVDNTRPLRTAARSGGGSGIAGMRERAHALGGTVTAGPRPDGGFRVAALLPVAPRETPAATGESAHPEREGR GT:EXON 1|1-401:0| BL:SWS:NREP 1 BL:SWS:REP 191->375|NARX_SHIFL|3e-12|33.1|172/598| COIL:NAA 33 COIL:NSEG 1 COIL:REGION 146->178| TM:NTM 5 TM:REGION 5->27| TM:REGION 34->56| TM:REGION 61->83| TM:REGION 85->107| TM:REGION 117->139| SEG 40->48|ldllgylll| SEG 61->84|aplpvlavtlaacagyllggygyg| SEG 86->99|vflalvvafltaat| SEG 148->190|aegvrqrraavearaqraeaarrdaeaqrrrraseerlsiare| SEG 247->259|agaplgppepapg| SEG 340->351|aarsgggsgiag| BL:PDB:NREP 1 BL:PDB:REP 191->333|3gigA|2e-07|29.0|131/212| RP:PDB:NREP 2 RP:PDB:REP 191->375|3ehjA|6e-14|20.1|169/196| RP:PDB:REP 352->401|2bu7A|4e-07|10.0|50/358| HM:PFM:NREP 3 HM:PFM:REP 183->247|PF07730|4.7e-20|43.1|65/68|HisKA_3| HM:PFM:REP 296->381|PF02518|9.8e-10|24.4|86/111|HATPase_c| HM:PFM:REP 37->101|PF09913|0.00052|28.6|63/389|DUF2142| RP:SCP:NREP 1 RP:SCP:REP 264->383|1l0oA|7e-07|15.8|120/141|d.122.1.3| HM:SCP:REP 253->381|1b3qA3|5.3e-12|20.9|129/185|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 299 OP:NHOMOORG 117 OP:PATTERN -------------------------------------------------------------------- 1-1-N-22---1-1-11--------1------1---5633-21F7A34265211-2-1--3473E4AGOE41111111-11-------------------------------------------------------11122--------2----------------------------------21---------------------------------------------------------------------------------------------------------------------------------------------------------------------3---------------------1------------------------------------------1---------------------1---------------------1---------------------------------------------------------------------------1-------1-----------------------1------------------------------------------------------------------------------------1----------1---------1-----1111111111-1111111111111111111111-1--------------------1111111----------------------------------------------------------------1---------1---------------------------11-11----------------------------------------------------------------1- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 211 STR:RPRED 52.6 SQ:SECSTR ##############################################################################################################################################################################################HHHHHHHHHHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHHHHTTTccccccccEEEEHHHHHHHHHHHHHHHHHHTTcEEcccccccccccHHHHHHHHHHHHHHHHHHHHTcccEEEEEEEEcccEEEEEEEEcccTcTccccTTcccHHHHHHHHHHTTcEEEEEccccEEEEEEEEEEccTTTcccccccccHHHHGGG DISOP:02AL 1-4, 216-218, 381-401| PSIPRED ccccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEccEEEEEEEccccccccccccccccHHHHHHHHHHHccEEEEEEcccccEEEEEEEEccccccccccccccccccccc //