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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55265.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.129.3
:152 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->148 1xfsB PDBj 5e-05 27.2 %
:RPS:PDB   17->145 3cnwB PDBj 6e-08 6.2 %
:RPS:SCOP  15->148 1z94A1  d.129.3.5 * 9e-16 21.2 %
:HMM:SCOP  13->152 2gkcA1 d.129.3.5 * 2.1e-22 26.1 %
:RPS:PFM   55->141 PF08327 * AHSA1 2e-04 29.9 %
:HMM:PFM   26->145 PF08327 * AHSA1 2e-18 25.6 117/123  

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55265.1 GT:GENE BAD55265.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 442210..442668 GB:FROM 442210 GB:TO 442668 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55265.1 LENGTH 152 SQ:AASEQ MVDQSTRLPDLSARPHELSVERVMTAPASLLYAALTRGFDIWLAAPDSVRMRPEVGEPFYFETEFEGKRNPHYGRFLRLTPDREVEFTWVTAATEGAETVVRVELVKQPRGIRLRLAHAGFASAAVRDLHQQVWPRMLEQLDERISGEPNRA GT:EXON 1|1-152:0| BL:PDB:NREP 1 BL:PDB:REP 20->148|1xfsB|5e-05|27.2|125/149| RP:PDB:NREP 1 RP:PDB:REP 17->145|3cnwB|6e-08|6.2|128/137| RP:PFM:NREP 1 RP:PFM:REP 55->141|PF08327|2e-04|29.9|87/124|AHSA1| HM:PFM:NREP 1 HM:PFM:REP 26->145|PF08327|2e-18|25.6|117/123|AHSA1| GO:PFM:NREP 1 GO:PFM GO:0006950|"GO:response to stress"|PF08327|IPR013538| RP:SCP:NREP 1 RP:SCP:REP 15->148|1z94A1|9e-16|21.2|132/140|d.129.3.5| HM:SCP:REP 13->152|2gkcA1|2.1e-22|26.1|138/0|d.129.3.5|1/1|Bet v1-like| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 138 STR:RPRED 90.8 SQ:SECSTR ##########ccTTEEEEEEEEEEcccHHHHHHHHccTTcHHHHcTTcccEEEEGGGTEEEEccTTccccEEEEEEEEETTTTEEEEEEEcccEEEEEEEEEEEEcccTTcEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHTT#### DISOP:02AL 1-10, 147-152| PSIPRED ccccccccccccccccEEEEEEEEcccHHHHHHHHccHHEEEEEccccEEEEEccccEEEEEEccccccccccEEEEEEEcccEEEEEEEccccccccEEEEEEEEEcccccEEEEEEcccccHHHHHHHHccHHHHHHHHHHHHccccccc //