Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55265.1
DDBJ : hypothetical protein
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 2/915 : Eukaryota 0/199 : Viruses 0/175 --->[See Alignment]
d.129.3
:152 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 20->148 1xfsB PDBj 5e-05 27.2 %
:RPS:PDB 17->145 3cnwB PDBj 6e-08 6.2 %
:RPS:SCOP 15->148 1z94A1 d.129.3.5 * 9e-16 21.2 %
:HMM:SCOP 13->152 2gkcA1 d.129.3.5 * 2.1e-22 26.1 %
:RPS:PFM 55->141 PF08327 * AHSA1 2e-04 29.9 %
:HMM:PFM 26->145 PF08327 * AHSA1 2e-18 25.6 117/123
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55265.1
GT:GENE BAD55265.1
GT:PRODUCT hypothetical protein
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION 442210..442668
GB:FROM 442210
GB:TO 442668
GB:DIRECTION +
GB:PRODUCT hypothetical protein
GB:PROTEIN_ID BAD55265.1
LENGTH 152
SQ:AASEQ MVDQSTRLPDLSARPHELSVERVMTAPASLLYAALTRGFDIWLAAPDSVRMRPEVGEPFYFETEFEGKRNPHYGRFLRLTPDREVEFTWVTAATEGAETVVRVELVKQPRGIRLRLAHAGFASAAVRDLHQQVWPRMLEQLDERISGEPNRA
GT:EXON 1|1-152:0|
BL:PDB:NREP 1
BL:PDB:REP 20->148|1xfsB|5e-05|27.2|125/149|
RP:PDB:NREP 1
RP:PDB:REP 17->145|3cnwB|6e-08|6.2|128/137|
RP:PFM:NREP 1
RP:PFM:REP 55->141|PF08327|2e-04|29.9|87/124|AHSA1|
HM:PFM:NREP 1
HM:PFM:REP 26->145|PF08327|2e-18|25.6|117/123|AHSA1|
GO:PFM:NREP 1
GO:PFM GO:0006950|"GO:response to stress"|PF08327|IPR013538|
RP:SCP:NREP 1
RP:SCP:REP 15->148|1z94A1|9e-16|21.2|132/140|d.129.3.5|
HM:SCP:REP 13->152|2gkcA1|2.1e-22|26.1|138/0|d.129.3.5|1/1|Bet v1-like|
OP:NHOMO 2
OP:NHOMOORG 2
OP:PATTERN -------------------------------------------------------------------- ------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 138
STR:RPRED 90.8
SQ:SECSTR ##########ccTTEEEEEEEEEEcccHHHHHHHHccTTcHHHHcTTcccEEEEGGGTEEEEccTTccccEEEEEEEEETTTTEEEEEEEcccEEEEEEEEEEEEcccTTcEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHTT####
DISOP:02AL 1-10, 147-152|
PSIPRED ccccccccccccccccEEEEEEEEcccHHHHHHHHccHHEEEEEccccEEEEEccccEEEEEEccccccccccEEEEEEEcccEEEEEEEccccccccEEEEEEEEEcccccEEEEEEcccccHHHHHHHHccHHHHHHHHHHHHccccccc
//
[GTOP]
