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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55288.1
DDBJ      :             putative trehalose-6-phosphate phophatase
Swiss-Prot:             

Homologs  Archaea  21/68 : Bacteria  275/915 : Eukaryota  63/199 : Viruses  0/175   --->[See Alignment]
a.102.1c.108.1
:856 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   24->236 1u02A PDBj 6e-12 33.3 %
:RPS:PDB   475->852 1agmA PDBj 2e-40 14.8 %
:RPS:SCOP  24->249 1u02A  c.108.1.15 * 2e-38 27.2 %
:RPS:SCOP  475->852 1agmA  a.102.1.1 * 3e-41 15.7 %
:HMM:SCOP  23->257 1u02A_ c.108.1.15 * 6.9e-38 29.3 %
:HMM:SCOP  460->839 1gaiA_ a.102.1.1 * 2e-81 42.6 %
:RPS:PFM   28->226 PF02358 * Trehalose_PPase 4e-21 38.1 %
:HMM:PFM   476->845 PF00723 * Glyco_hydro_15 9e-37 24.6 349/448  
:HMM:PFM   28->238 PF02358 * Trehalose_PPase 1.8e-36 33.8 210/235  
:BLT:SWISS 17->243 OTSB_MYCTU 3e-15 35.3 %
:BLT:SWISS 265->340,476->795 YAY3_SCHPO 2e-56 38.3 %
:BLT:SWISS 343->445 MURC_POLNA 4e-04 37.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55288.1 GT:GENE BAD55288.1 GT:PRODUCT putative trehalose-6-phosphate phophatase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(460216..462786) GB:FROM 460216 GB:TO 462786 GB:DIRECTION - GB:PRODUCT putative trehalose-6-phosphate phophatase GB:PROTEIN_ID BAD55288.1 LENGTH 856 SQ:AASEQ MSAQDLPQELRRALSTVAREPRLLVASDYDGTLAPIVSDPSKAYPHRESVSALRALAGLTGTTAAVISGRALRDLAALSRLPVEVQLIGSHGSEFDVGFVHAIDNDAKQLLHEVQAALTQIADDNPGASVETKPASVALHVRNAAPEIGRRALEAVRQGPARWVGVQVTEGKAVIELAVIQTDKGTALDTIRHQEGATAAVFFGDDVTDEKAFRVLSGPDVGIKVGEGESLAKYRVDSTEAVACALAFLLEERRTWLAGASAPRIERLTMLASPRSVALLTPDATVTWFCHPEPDSAAVFAHLLGGPQAGHFSVAPERPGLPLSQRYVDGTMTVETRWASLQVTDYLPHDVAPTRTDLTRVISGHARAVVTFAPRPEFGQVPVSLEADRDGLKVLGTNDPMVLRSPGVQWRIDNDGVHDVATAVVDPAQGPVVLELRCGTHDLDPASASETERRREAERYWREWANSLELPPLKPDLMKRSALTLRGLVHAPSGSILAAATTSLPEDIGGVRNWDYRYCWLRDAALTAQSLVTLGSLTEAEQFLGWVHRVLETLPGPERLHPLYTIYGETLPPEAVIDQLPGYAGSRPVRVGNAANMQVQLDVFGPIVDLISTLAHARERKGITEPAKALPDADWELVHAMVAAVQRRWTEPDHGIWEIRGNPRHHVYSKVMGWLTVDRALTLAQKFDRPVDPEWVSLRETIAEEVKSKGWNDEVQSFTAAYDGTDLDAATLHIGLSGLIDPSDPRFAATVVATEAELRSGSTVYRYHHDDGLPGGEGGFHLCAAWLVEAYLLIGKRSDAEALFAQLVDVAGPTGLLSEEYDPVAERSLGNHPQAYSHLGLLRCAQLLSQPVQVLV GT:EXON 1|1-856:0| BL:SWS:NREP 3 BL:SWS:REP 17->243|OTSB_MYCTU|3e-15|35.3|221/391| BL:SWS:REP 265->340,476->795|YAY3_SCHPO|2e-56|38.3|385/649| BL:SWS:REP 343->445|MURC_POLNA|4e-04|37.4|91/478| SEG 52->65|alralagltgttaa| SEG 70->81|ralrdlaalsrl| SEG 446->465|asaseterrreaerywrewa| BL:PDB:NREP 1 BL:PDB:REP 24->236|1u02A|6e-12|33.3|189/222| RP:PDB:NREP 1 RP:PDB:REP 475->852|1agmA|2e-40|14.8|357/470| RP:PFM:NREP 1 RP:PFM:REP 28->226|PF02358|4e-21|38.1|194/222|Trehalose_PPase| HM:PFM:NREP 2 HM:PFM:REP 476->845|PF00723|9e-37|24.6|349/448|Glyco_hydro_15| HM:PFM:REP 28->238|PF02358|1.8e-36|33.8|210/235|Trehalose_PPase| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF02358|IPR003337| GO:PFM GO:0005992|"GO:trehalose biosynthetic process"|PF02358|IPR003337| RP:SCP:NREP 2 RP:SCP:REP 24->249|1u02A|2e-38|27.2|217/229|c.108.1.15| RP:SCP:REP 475->852|1agmA|3e-41|15.7|357/470|a.102.1.1| HM:SCP:REP 23->257|1u02A_|6.9e-38|29.3|225/229|c.108.1.15|1/1|HAD-like| HM:SCP:REP 460->839|1gaiA_|2e-81|42.6|345/0|a.102.1.1|1/1|Six-hairpin glycosidases| OP:NHOMO 640 OP:NHOMOORG 359 OP:PATTERN ------2322222222--1-111-------------------------1-111--------122---- 2-31311222211122233-33112233333132223253154332222322344212--544-1165522-----------2--------1-1---------2232122---------------11---1--1-1---------2-------------------------------------11----------------------------------------------1---------------------------------------------------------------------------------------------------------------------------1----1---12----------1--1-----1-11133111111------------331232342-2--------121--1--11------------------111-1-1-------------------------------121------13113231222233422222222332211--111-131112212----1--------------1--------1-1-------1131-----3343342-------------------------------------------------------------311--------2---1-1111111111-1111111111111111111111-----1111111111111111--1-11111-----------------------------1----------------1111111---1-----1111-121--212------------------------1144444343--------22--------------------------------------------------11- ----23--------11111-222111-------111----------2222112222111111----1--1----1-----------22-232122222221--3421--2-------------------------------------------------------------------1-8-----1324231------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 777 STR:RPRED 90.8 SQ:SECSTR #######################EEEEEccTTTccccc#GGGccccHHHHHHHHHHHHHcEEE##EEccccHHHHHHHcccccEEEEEEcTTGGGGHHHHHHHHHHHTTHH###########HHcTTcEEEEETTEEEEEcTTccHHHHHHHHHH#####HHHHTcEEEEcc#EEEEEcTTccHHHHHHHHH###TTccEEEEEccHHHHHHHHT#TTTcEEEEEccccccccEEE#############################EEEEETTTTEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEccTTcEEEcTTccEEEEEEEEETTEEEEEEEETTTccEEEEEEcccccEEEEcTTEEEEcEEEEEEEEEEcccccTTTccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHTHHHHHHHTcEEcccccTTcTTcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHTTcTcTTcTTcTTccTTcccccccccccccccEEHHHHHHHHHHHHHHTcGGGHHHHHHHHHHHHHHHHccTTccTTTTGGGccEEcTTccccccccccccTcccHHHHHHHHHHHHHHHHHHHTTcHHHHHccHHHHHHHcHHHHTHHHHHHHHHHHHHHHTTccEEcTTcccEEEEEEHHHHHHHHHHHHHHHHHHHHTTcccHccHHHHHHHHHHHHHGGGccccccccEEccccccccTHHTccccTTTTcTTcHHHHHHHHHHHHTTTTcTTccccccTTccGGGccccHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHccTTcccccEEcTTTccEEcccccHHHHHHHHHHHHHHTTccT### DISOP:02AL 1-6, 8-10, 252-267| PSIPRED cccccccHHHHHHHHHHHccccEEEEEEcccccccccccccEEEccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHccccccEEEEEccEEEEccccccccccHHHHHHHHHHHHHHHHHHcccEEEEEccEEEEEEEccccHHHHHHHHHHHHHHHHHcccEEEEcccEEEEEEEccccHHHHHHHHHHHccccEEEEEEccccHHHHHHHHccccEEEEEcccccEEEEEEccHHHHHHHHHHHHHHHHHHHHcccccHHHccEEEEcccEEEEEEccccEEEEEccccccHHHHHHHcccccccEEEEEEcccccEEEEEEEccccEEEEEEEEEEEEEEEcccccccEEEEEEEEEccEEEEEEEEEcccccccccEEEEEccEEEEEcccccEEEEccccEEEEcccccEEEEEEEEccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccccEEEEccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccEEEcccccccccccccccccccccccccEEcccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccHHHHHHHHHcccccccHHHHHHHHHHHHHccccccEEEEcccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcc //