Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55294.1
DDBJ : hypothetical protein
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 34/915 : Eukaryota 1/199 : Viruses 0/175 --->[See Alignment]
d.38.1
:145 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB 14->120 2bi0A PDBj 2e-06 11.2 %
:RPS:SCOP 14->136 2bi0A1 d.38.1.4 * 1e-08 11.4 %
:HMM:SCOP 4->130 2bi0A1 d.38.1.4 * 3.3e-14 24.4 %
:RPS:PFM 22->109 PF01575 * MaoC_dehydratas 6e-04 33.0 %
:HMM:PFM 36->123 PF01575 * MaoC_dehydratas 2.7e-08 21.6 88/123
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55294.1
GT:GENE BAD55294.1
GT:PRODUCT hypothetical protein
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION 469218..469655
GB:FROM 469218
GB:TO 469655
GB:DIRECTION +
GB:PRODUCT hypothetical protein
GB:PROTEIN_ID BAD55294.1
LENGTH 145
SQ:AASEQ MTETTDAPPIPARIEVGTTLPELVIHADPTFVISTAIATRDFQDVHHDRDKAVARGSKDIFVNILTDTGLVQRFVTDWAGPRAVVKSIALRLGVPLYAGDTLTLTGTVTEVSDTDVTIAVVGRDSLGDHITATAVIGFTGGSLDQ
GT:EXON 1|1-145:0|
RP:PDB:NREP 1
RP:PDB:REP 14->120|2bi0A|2e-06|11.2|107/327|
RP:PFM:NREP 1
RP:PFM:REP 22->109|PF01575|6e-04|33.0|88/116|MaoC_dehydratas|
HM:PFM:NREP 1
HM:PFM:REP 36->123|PF01575|2.7e-08|21.6|88/123|MaoC_dehydratas|
GO:PFM:NREP 2
GO:PFM GO:0008152|"GO:metabolic process"|PF01575|IPR002539|
GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01575|IPR002539|
RP:SCP:NREP 1
RP:SCP:REP 14->136|2bi0A1|1e-08|11.4|123/178|d.38.1.4|
HM:SCP:REP 4->130|2bi0A1|3.3e-14|24.4|127/0|d.38.1.4|1/1|Thioesterase/thiol ester dehydrase-isomerase|
OP:NHOMO 49
OP:NHOMOORG 35
OP:PATTERN -------------------------------------------------------------------- ----2---------13311-11--3111111311111322--------------------111----1-11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------------------------------------------------------------------------------------------------------------------------------------------1--------1------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 138
STR:RPRED 95.2
SQ:SECSTR TccccccccccccccTTcEEccccEEccHHHHHHHHHHHccccHHHHcHHHHHHHHcccccccHHHHHHHHHHHHTTTTTTccEEEEEcEEccccccTTcEEEEEEEEEEEEEccccTTcEETTEEEEEEEEEEccEE#######
DISOP:02AL 1-4, 142-145|
PSIPRED cccccccccccccccccccccccEEEEcHHHHHHHHHHHccccccEEcHHHHHHcccccccHHHHHHHHHHHHHHHHHccccEEEEEEEcEEccccccccEEEEEEEEEEEcccEEEEEEEEEcccccEEEEEEEEEEccccccc
//
[GTOP]
