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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55294.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.38.1
:145 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   14->120 2bi0A PDBj 2e-06 11.2 %
:RPS:SCOP  14->136 2bi0A1  d.38.1.4 * 1e-08 11.4 %
:HMM:SCOP  4->130 2bi0A1 d.38.1.4 * 3.3e-14 24.4 %
:RPS:PFM   22->109 PF01575 * MaoC_dehydratas 6e-04 33.0 %
:HMM:PFM   36->123 PF01575 * MaoC_dehydratas 2.7e-08 21.6 88/123  

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55294.1 GT:GENE BAD55294.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 469218..469655 GB:FROM 469218 GB:TO 469655 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55294.1 LENGTH 145 SQ:AASEQ MTETTDAPPIPARIEVGTTLPELVIHADPTFVISTAIATRDFQDVHHDRDKAVARGSKDIFVNILTDTGLVQRFVTDWAGPRAVVKSIALRLGVPLYAGDTLTLTGTVTEVSDTDVTIAVVGRDSLGDHITATAVIGFTGGSLDQ GT:EXON 1|1-145:0| RP:PDB:NREP 1 RP:PDB:REP 14->120|2bi0A|2e-06|11.2|107/327| RP:PFM:NREP 1 RP:PFM:REP 22->109|PF01575|6e-04|33.0|88/116|MaoC_dehydratas| HM:PFM:NREP 1 HM:PFM:REP 36->123|PF01575|2.7e-08|21.6|88/123|MaoC_dehydratas| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF01575|IPR002539| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01575|IPR002539| RP:SCP:NREP 1 RP:SCP:REP 14->136|2bi0A1|1e-08|11.4|123/178|d.38.1.4| HM:SCP:REP 4->130|2bi0A1|3.3e-14|24.4|127/0|d.38.1.4|1/1|Thioesterase/thiol ester dehydrase-isomerase| OP:NHOMO 49 OP:NHOMOORG 35 OP:PATTERN -------------------------------------------------------------------- ----2---------13311-11--3111111311111322--------------------111----1-11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------------------------------------------------------------------------------------------------------------------------------------------1--------1------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 138 STR:RPRED 95.2 SQ:SECSTR TccccccccccccccTTcEEccccEEccHHHHHHHHHHHccccHHHHcHHHHHHHHcccccccHHHHHHHHHHHHTTTTTTccEEEEEcEEccccccTTcEEEEEEEEEEEEEccccTTcEETTEEEEEEEEEEccEE####### DISOP:02AL 1-4, 142-145| PSIPRED cccccccccccccccccccccccEEEEcHHHHHHHHHHHccccccEEcHHHHHHcccccccHHHHHHHHHHHHHHHHHccccEEEEEEEcEEccccccccEEEEEEEEEEEcccEEEEEEEEEcccccEEEEEEEEEEccccccc //