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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55298.1
DDBJ      :             putative ATPase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  352/915 : Eukaryota  142/199 : Viruses  0/175   --->[See Alignment]
c.18.1c.37.1
:322 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  105->319 1oe4A  c.18.1.3 * 7e-10 10.3 %
:HMM:SCOP  16->156 1iqpA2 c.37.1.20 * 3.4e-13 27.3 %
:RPS:PFM   39->277 PF03969 * AFG1_ATPase 1e-25 32.4 %
:HMM:PFM   24->315 PF03969 * AFG1_ATPase 5.9e-73 39.4 292/362  
:BLT:SWISS 39->284 YBQ2_SCHPO 3e-20 27.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55298.1 GT:GENE BAD55298.1 GT:PRODUCT putative ATPase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 471981..472949 GB:FROM 471981 GB:TO 472949 GB:DIRECTION + GB:PRODUCT putative ATPase GB:PROTEIN_ID BAD55298.1 LENGTH 322 SQ:AASEQ MTTGGVAVSGIVELDAGQRAAADRLAALLDGGRPRRRARGVYLHGRPGRGKTMLMDHLLAATRTRTRRWHFHEFFALLHRARQDAGSVDGALTALIGDAELVCFDEFHADDIGDAMLMARLLDALFARRVPLVVTSNQRPEQLLPNPLFHDRFLPVIAAIRAHLDVVAVDGPLDYRRHGSGRTAAGFAAGRYLLGGPPCAATTAVRIGAHTVPVHAATAGTLVASFTDLCGSAVSAADYVALAARFERWVIGAVPLLRTVHADLVTRWIALIDVLYDADRPVIVHAAAPPAALAAGMPAGSDLDRTVSRLYEISQPAARGTV GT:EXON 1|1-322:0| BL:SWS:NREP 1 BL:SWS:REP 39->284|YBQ2_SCHPO|3e-20|27.2|246/454| SEG 14->33|ldagqraaadrlaalldggr| SEG 62->68|trtrtrr| SEG 114->129|damlmarlldalfarr| SEG 232->244|savsaadyvalaa| SEG 286->299|aaappaalaagmpa| RP:PFM:NREP 1 RP:PFM:REP 39->277|PF03969|1e-25|32.4|238/348|AFG1_ATPase| HM:PFM:NREP 1 HM:PFM:REP 24->315|PF03969|5.9e-73|39.4|292/362|AFG1_ATPase| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF03969|IPR005654| RP:SCP:NREP 1 RP:SCP:REP 105->319|1oe4A|7e-10|10.3|203/245|c.18.1.3| HM:SCP:REP 16->156|1iqpA2|3.4e-13|27.3|132/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 585 OP:NHOMOORG 494 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1111------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111111111111111111111111111-11111111111-11111111111111111111111111111111111111-11111111--------------------------1111-1111111111111111112111111111111111111111111111111111----111111111---111-----------------------------------------------------------11-111122122222222122222212222----111------12111111111111111-1111111111111111111222111111111111111111111111111111-111111111111--11111111111-1212---------------1111111111313333333323333322211------1-1111111111111111111111111111--1-------------------------------------------------------- -----11---1-11122111111111111111111-1111111111-1111111--11111111111111111-111-1111--1-11-1-12111---111-111--311121221-----1-1----121-1111---1--1-11---1-11-11-1111-111-11--111----2F1111131111222111212 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 316-319, 321-322| PSIPRED cccccEEEEEcccccHHHHHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHccccHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHccccccHHHHHHHHHHHHHHcEEEEcccccccccccccccHHHHHHHHHHHcccccccccEEEEEcEEEEEEEEcccEEEEcHHHHccccccHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHHccccEEEEccccHHHHccccHHHHHHHHHHHHHHHHccHHHcccc //